Gene MmarC7_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0575 
Symbol 
ID5328589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp579383 
End bp579649 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content38% 
IMG OID640793101 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_001329794 
Protein GI150402500 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.306359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.178324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTTG CAATTCCATC CGTAGTTATT GATATATTTG AAGAAGATGG CGAAAAATAC 
GCGCTTGCTG AATACAAGGG TGTAAAACAA AAAGCAAAAC TCGCACTTCT AGAAGGCGTT
GAAATTGGAG ATTATGTGCT GATCCACACA GGATACGCGC TTGAAAAAAT GAGTGAAGAC
GAAGCAAAAT TGAGTTTAGA TGCATGGGAA GAATTGTTCG ATGTACTCGA TGAAATGGAC
GGAGTTAAAA AAGAAAATTC CGAATAA
 
Protein sequence
MCLAIPSVVI DIFEEDGEKY ALAEYKGVKQ KAKLALLEGV EIGDYVLIHT GYALEKMSED 
EAKLSLDAWE ELFDVLDEMD GVKKENSE