| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0569 |
|---|
| Symbol | rpl13p |
|---|
| ID | 5328598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 576758 |
|---|
| End bp | 577171 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640793094 |
|---|
| Product | 50S ribosomal protein L13P |
|---|
| Protein accession | YP_001329788 |
|---|
| Protein GI | 150402494 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0102] Ribosomal protein L13 |
|---|
| TIGRFAM ID | [TIGR01077] ribosomal protein L13, archaeal/eukaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.396644 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTTG TAAACGCTGA AAATGCAGTT GTTGGAAGAT TAGCTTCATA CGTTGCTAAA
CTTGCATTAA GCGGTGAAGA AGTAACCGTT GTAAACGCTG AAAAAGCAAT TATGACTGGA
AACAAAGAAT ACATATTCCA AAAATATGTA CAACTCAGAA CTAGAAAAAG TATTTCAAAC
CCTAAAAAAA TGGGTCCAAA ATATCCAAGA AGGCCTGACG ACATCGTAAG AAGAGTTATC
AGAGGAATGC TCCCATACAA AAAACCTAGA GGAGTAGAAG CTTTCAAAAA CATTAAAATT
GAAGTTGGAG TTCCTGAAGG AGTTTCTATC GACATTAACT TAGGTAGCGA ACCAAACACA
ATCAAATATG TAACCGTTGG AGAATTGAGC CAATTCTTAG GCGCTAAATT CTAA
|
|---|
| Protein sequence | MVVVNAENAV VGRLASYVAK LALSGEEVTV VNAEKAIMTG NKEYIFQKYV QLRTRKSISN
PKKMGPKYPR RPDDIVRRVI RGMLPYKKPR GVEAFKNIKI EVGVPEGVSI DINLGSEPNT
IKYVTVGELS QFLGAKF
|
|---|
| |