| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0550 |
|---|
| Symbol | |
|---|
| ID | 5328634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 559718 |
|---|
| End bp | 561121 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640793073 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001329769 |
|---|
| Protein GI | 150402475 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3287] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAATTTA TCGAATTCGG GTACGGTACT TCAACAGATG AAAATTCTTT AAAAGCGGGG
GCTCATGCTG CATCCAATGC TTTGAAAATG ATGAAGAAGT ATTCAGAAAA ACCAAATATT
GTATTTTTAT ATTCTTCTCC AGACTATGAT CCTGAAGAAG TTCTTAACGG AGTAAAGTTA
ATTCTTGGAA ACACTGTACA GATAGTCGGT GGAAGTTCAA AATTCCAAGT TTGTGGAAAT
AAATTTTTGG AAAACGGGGT TTCGATTGGA ATTTTGGGTT CAAAATACTT CAGTACCGGA
ATGGGTGTCG GACTTGGAAT TTCGATAAAC CCAAAAGAAT CGGGAAAAAA AGCAGTTAAA
GATGCAGTTG AAAACCTCGG GATGCTTCCA AAATTGCTTT ATGTAATAAT GGATTTTTGT
AAATGCGAAG AACAGGTTTT AAAAGGAATT GTTGAAGAAC TTGGGGTTAC AATCCCGATT
TTTGGAGGAG TTTCCTCCGA TAATTTCGAA TTCGAACATA CATACCAGTA TGGAAACGAT
GTTTATCTCG ACAGTATTGT TTGCGTCGCA TTTGGTGGGG ATATCGTACC AAAAATATCA
TACAATGACC ACGAGTACAA AGAACATCAT GGAAAATTGG AAAATGTAAT AAATAAATCA
GAAAAACGTG CTATTGAAGA AATAGGAAAT ATTTCTGCAA TAAAAAGATA TATTGAAATT
TCAGGATATG AGGGTTCTGT AAAAGACCTT GAAAAAGACC CTAAATTCTA TTTATCACAT
CCTTTAGGTA TTTTGGATAC TGCAGGAGAT ATCCATTTTA AAGGTCCGAT AGCAATTAAA
AATAAAAAAT TAATTACAGG GTCCAATATA AGCAACTCAA ATGAATTAAA AATAGAAACT
ATTGATAAAA ATGAATTGAA AAAGATATTT GAAACCAACA CAAATGTTTT GAAGAATACT
CAACCACATT ATGACCCTGC ATTTACATTT TACAATATTT CATCGTTTTT ATCAGAAATT
GATCCTGAAG AAATTGAAAA ACTGATTGAA AATTCGGATA TAAATCCGTT TTTTGGAAGT
TCGACTTTTG GAGAAATATC TTTTAGAAAA TATGGAAACT ATTCAATGAG CATGTGTTCT
TTTGCACCAG ATTTAGTTAC GATAAGTGCA AAAGAAGGAA TTCACATGTT TACAAAACAC
CCTGCAACAA AAGAAACACT TTTAAAAATC CACGAACTTG GAGGTTCGGT AAAAGTTGAA
GAACTTGCAA AATCGCTTGG AATACATAGG AGATCTGCAT ACGATAGGAT CGACCCACTC
TTAAAATACG GTTTTATCGA AAAAGACCAA GCAGTAATCA CTATCACTGA CTTTGGAAAA
CTTCTGCTTA AATTCGAATT TTAA
|
|---|
| Protein sequence | MEFIEFGYGT STDENSLKAG AHAASNALKM MKKYSEKPNI VFLYSSPDYD PEEVLNGVKL
ILGNTVQIVG GSSKFQVCGN KFLENGVSIG ILGSKYFSTG MGVGLGISIN PKESGKKAVK
DAVENLGMLP KLLYVIMDFC KCEEQVLKGI VEELGVTIPI FGGVSSDNFE FEHTYQYGND
VYLDSIVCVA FGGDIVPKIS YNDHEYKEHH GKLENVINKS EKRAIEEIGN ISAIKRYIEI
SGYEGSVKDL EKDPKFYLSH PLGILDTAGD IHFKGPIAIK NKKLITGSNI SNSNELKIET
IDKNELKKIF ETNTNVLKNT QPHYDPAFTF YNISSFLSEI DPEEIEKLIE NSDINPFFGS
STFGEISFRK YGNYSMSMCS FAPDLVTISA KEGIHMFTKH PATKETLLKI HELGGSVKVE
ELAKSLGIHR RSAYDRIDPL LKYGFIEKDQ AVITITDFGK LLLKFEF
|
|---|
| |