Gene MmarC7_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0548 
Symbol 
ID5328632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp557189 
End bp559108 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content35% 
IMG OID640793071 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001329767 
Protein GI150402473 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.271418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTA TACCTCCTAT TAAACGATTG GGAACTAAAT TAATAATTTA TTCCATAATC 
ACGGCGTTAA TTCCAATAGT AATGCTCGGT GCGGTATCTA CTGATACGAT AAACACCGAA
ATGACAAACC AGGCACAGGA AAAAATAAAT GATGATTTAA ATACTGCAGA GAGTGTGGTA
ACTCTTAAAC TGGATAAAAT TTCTGCAATG AACAAGTATA TCGTTTCTAA TGGGGATACT
GTTGATCTTT TAAAGAAGGG CAATACATTG GAACTGAAAA ATGTGGCATT ATCTTATAAG
GATGCATCAG ATCCTGATTT TGTTGTTTTT TTTGATAAAG ATGGAAATGT AATTGCAAGG
TCGAATTCTG ATGTAACCGG GGATAAATCT TATGAAAGTC TTTTTAAAAT GGTAATAAAC
AGTACTGGAT ACACCTCAAT AGAAGTTCTC GATAAAGAAG CCATAAAATA CGAAAATGTT
GATGAAATAG TAAATATTGA TATAAAAGGA ACAGAAGATT CGATAGATTC TACGGAAAGT
GTTCAAGATA GTGCAATGGC TTTGATATCT ATTGAACCAA TCTATGATGA AGATGGAACT
TTACTTGGGG CTGCAATGGC AGCAGATATT CTGAATAAGG ATTATTCTAT TGTGGATACT
GTAAAAGACG CTTCAAAAGA TGCTACAACA ATATTTTTAG GTGGTGTCAG GATATCCACA
AATGTTCAGG ACAATGGTGG AAGGGCAATT GGAACACTTG TTTCAGAAGA GGTCTATAAA
TATGTTGTTT TGGATGGAAA CACGTACTAT GGTAGGGCTT TTGTTGTAAA TGAATGGTAT
TTAACGGCTT ATGAGCCAAT TTATGATTCA AATGGCAAAA TTATAGGAAT GTTATTTGTC
GGAACTCCCG AAAGTAAGTT TTTAGCATTA CAGGCAGATG TTAGAAATCA AACCTTTGCA
GTTGGATTGA TTGGATTATT TATTGCCTTG ATGGTCTCAT ACCTTATAAA TCGAGGAATA
ATAAGTCCAC TTGAACAATT AAAGCAGGGT GCCGAACGGG TAAGTAATGG AAGATACGAT
CAAAAAGTCA TTGTTGATTC TGACGATGAA TTTGGTGAAC TTGCAAAAGC ATTTAACAAG
ATGGCAACTC AAATCAATAT TTCTGATGAA AAGCTAAAGA AACACGCAGA AGAATTGAAG
GCATCATATA ATGAATTAAA AGAACTCGAT AATTTAAAAT CCGAATTAAT TGCAATTGTT
TCACACGAAT TAAGAACTCC GCTTACTTCA ATAAAGGGTT ACGTTGAACT GGTCCTTGAT
GGTACAATGG GTGCAATAAA CGATTCCCAG AAAAAGTGTT TGCAGGTTGC AGACGATAAC
ATCGTAAGAC TTAGGAGATT AATTGAGAGT ATGCTTGATC TTTCAAAGAT TGAACGTGGA
GAACTTGAGA TGTACCGCGA AAAGGTAAAT CTTAAAGGAA TAGTATGCGA TGTTATCGAA
TATTTAAAGC CGCTTGCAAC TGAAAAAAAT ATTAAATTAA ACAGGGAAGT TGAAGAAATT
ACTATTGAAG CAGATAAAGA TAGGATTACT CAGGTTCTCA CTAATTTGAT AGAAAATGCG
ATAAAATTCA GTCCTGCAAA TGAATCCATT ATGATAAGTG GTGTTTTAGA GGACGAACAC
GTTCATTTGA AAGTAACTGA TCACGGTGCA GGTATTCCTA AAAAAGACAT GGAAAAAGTA
TTCAACAGGT TTTACCAGGT TGATTCATCA ACAAAGCGGA AAAAAGGTGG ATCAGGTCTT
GGACTTGCAG TCTGTAAAAG TATTGTCGAA GCACACAAAG GTTCGATCTG GGTTGAAAGT
GAACTTGGAA AGGGAAGTAC ATTCCACATA CTCCTTCCAA TATCTACCGA ATCCCAATAA
 
Protein sequence
MNTIPPIKRL GTKLIIYSII TALIPIVMLG AVSTDTINTE MTNQAQEKIN DDLNTAESVV 
TLKLDKISAM NKYIVSNGDT VDLLKKGNTL ELKNVALSYK DASDPDFVVF FDKDGNVIAR
SNSDVTGDKS YESLFKMVIN STGYTSIEVL DKEAIKYENV DEIVNIDIKG TEDSIDSTES
VQDSAMALIS IEPIYDEDGT LLGAAMAADI LNKDYSIVDT VKDASKDATT IFLGGVRIST
NVQDNGGRAI GTLVSEEVYK YVVLDGNTYY GRAFVVNEWY LTAYEPIYDS NGKIIGMLFV
GTPESKFLAL QADVRNQTFA VGLIGLFIAL MVSYLINRGI ISPLEQLKQG AERVSNGRYD
QKVIVDSDDE FGELAKAFNK MATQINISDE KLKKHAEELK ASYNELKELD NLKSELIAIV
SHELRTPLTS IKGYVELVLD GTMGAINDSQ KKCLQVADDN IVRLRRLIES MLDLSKIERG
ELEMYREKVN LKGIVCDVIE YLKPLATEKN IKLNREVEEI TIEADKDRIT QVLTNLIENA
IKFSPANESI MISGVLEDEH VHLKVTDHGA GIPKKDMEKV FNRFYQVDSS TKRKKGGSGL
GLAVCKSIVE AHKGSIWVES ELGKGSTFHI LLPISTESQ