Gene MmarC7_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0546 
Symbol 
ID5328643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp555672 
End bp556496 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content44% 
IMG OID640793069 
Productformate/nitrite transporter 
Protein accessionYP_001329765 
Protein GI150402471 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0683482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTAA ACCCACCCGA CAAAATGGTG GAACTTGCAG GAAATGCAGG TCAGGTAAAA 
GGAAACCTTA GTCCAAGCCA ACTTCTTGTC AGAGGAGTTA TGGGCGGCGC TTACATTGCA
ATAGGTGGTG GACTCGCTAC CGTTGTAGGA ACAGGAATAG GTACGGCATT AGGTGCCGGT
TTTGGTAAAT TCATGGCAGC CGCAGTGTTC CCCGTAGGGC TGATCTTGAT TATCTTAACA
GGAATGGAAC TGGTTACTGG AGATATGATG TTACTGCCTG TAGCAGTTTT CCAGAGAAAG
GCTTCCTATG CACAGTTGAT AAAAGTATGG ATTTATGTTT ACATTGGTAA CCTTATTGGT
TCCTTAATAT ATGCTTCAAT GATGGCATTT GGTCCATTGA GATCATTTGA CACGACAACC
GGTGCAGCTA GTGTAAATGC ATTTGGTCAA TCAGCAATAA ACACCGCTCA AGCTAAAGTT
TTACCATACA TGGCAGCAGG ATCTGTCGGA TGGCTTGCAG CACTTGTTAA AGGTATTGGT
TGTAACTGGT TAGTTAACCT TGCAGTTATT GGTTCAATGG CTTCAACGAG TATTCTCGGT
AAGTTCTTCA TGATATGGTT CCCAATCATG GCGTTCGTTG CAACCGGATT TGAGCACTGT
GTGGCAAACA TGTATTTCAT CCCTGCAGGT ATGATGCTTG GTGCAACAGT AAGCGTTGCA
GACTGGTGGC TTTGGAATAT CATTCCAGTA ACCATTGGAA ACATCATCGG TGCAGTGGTA
TTCGTATCAA TGATCTACCA GTTCGCATAC GGTAAAAAAA TCTAA
 
Protein sequence
MDVNPPDKMV ELAGNAGQVK GNLSPSQLLV RGVMGGAYIA IGGGLATVVG TGIGTALGAG 
FGKFMAAAVF PVGLILIILT GMELVTGDMM LLPVAVFQRK ASYAQLIKVW IYVYIGNLIG
SLIYASMMAF GPLRSFDTTT GAASVNAFGQ SAINTAQAKV LPYMAAGSVG WLAALVKGIG
CNWLVNLAVI GSMASTSILG KFFMIWFPIM AFVATGFEHC VANMYFIPAG MMLGATVSVA
DWWLWNIIPV TIGNIIGAVV FVSMIYQFAY GKKI