| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0537 |
|---|
| Symbol | |
|---|
| ID | 5328651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 543528 |
|---|
| End bp | 545393 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640793060 |
|---|
| Product | glycoside hydrolase 15-related |
|---|
| Protein accession | YP_001329756 |
|---|
| Protein GI | 150402462 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
|---|
| TIGRFAM ID | [TIGR01577] oligosaccharide amylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGGAA TTATTGGGAA TGGAAATATC CTCGCAAAGA TAGATGATTC AGGTTCTATC
GAATACATGT TTTACCCGAG CCTCGGCTAT GAAAAACACA TTTTTGACGC TTCTTTTGCA
ATTTTCAATC ACGGCCTCAA GTGGGCATGG GATAACAACT GGGATATCAA CCAGAGTTAC
GTAAAAGATA CGAATATTTT GAGAACTACT TACGAATGCA ACGAGTTTTT AATGGAATCA
AGGGATTATA TTCCAATTTC ACACAATATT ATTATAAAGC AGATTTCAAT TTCGAATAAA
ACCGATGAAA CTCAGGATTT AAAGCTATTT TTTTATGAAA ATTTACGAAT GGGGGAAATT
CCAAAAGAAA ACACGGTTCA ATTTATTAAA GACCACCAGA CGATACTAAA ATATGATGGA
ACTTATTCTA CGTGTATTGG AAGTGATAAA AAAATCGATT CTTACCAGTG TGGGGTTCGT
TCATCCGATA AAAGTGCATT ACTCGATATA GCAAATGGAC TTTTAAAAGA ATATTCTAGT
TCTTCAGGCC TTATAACTGA TAGTGCCATT TCGTGGAATT TAAAATTACT TCCCGGTCAA
AAACAGTCCG TTTCCGTTTA CATAATTATA AATCAGTACA ATGGAGATTA CCAAAAATTA
ATGGAAATCA TGGATTCAAT CAAGGTTGTT ATAGATAACC ACGAAGATTT TTACCAGCTT
ACAAATTCTT ACTGGAAAAA TTTACTAGAA ACAACGATCA GTAAACTCAG TGCAAATGAA
TTAAATCGGG TTATGATGTG CGAAGATCTG TGTAAAAGAT CGTTTCTTAC ATTATTACTG
TTATGTGATC GAGGTGGAGG AATAATGGCA TCACCGTCGT TATATCCTGA TTACAGGCAT
GTCTGGTGCA GGGATGGTGG TTACATCGCA GTAGCACTTT CTCTCTGTGG TCAATCCAGT
ATCGTTGAAA AATATTTTGA ATGGTGCAGA AAAACCCAAA ATGAGGATGG TTCTTGGGTT
CAGAGTTACT ATATCAATGG AATTCCCCGA TTAACTGCAA TACAAATTGA TCAGGTCGGA
ACTACGCTTT GGGCAGCTTT AATTCATTAC CGAAAGAGCG ATAATGAGAA ATTTTTAAAG
AAAAATTGGG CAATGATAAA AAAAGCAGCA GATTATCTTT CAAATGTGGC AGTAACTCTT
TATCCAAGCT ATGACTTGTG GGAAGAGAAA TATGGTGTTT TTACATACAC GTTGGGTTCA
GTTTATGGCG GATTGAAATC AGCAATAGAA ATTGCAAAAA TTTTGGAAGA GAATAGTGAA
TCTATTGAAA AATGGCAAAA TGCAAGCGAA TTTTTAAAAG AAGAAGTTGT TGAAAAAATA
TATTTAAATG ATAAAAATCG CTTTTTAAAG GCACTTCATC CAAAAGACGA AGCTTTGGAT
TCAAGTATAC TTGGGATAAG TTTTCCATTT AATTTAGTAA ATGCAGACGA CCCAAAAATG
GTTGCAACAG CAGATCAGAT AGAGTCCGCA TTTAATTATA AAGTTGGGGG AATTGGAAGA
TACCCTGAAG ACGTTTATTT CGGCGGAAAT CCTTGGATTA TAAATACATT ATGGCTTTAC
ATGTATTACG AAATGCTTGT TTACACCCTC TCAAAAAATA AATCGATTAA AAAAGAGATT
TTAGAAAATT ACCGTGAGAA ATGTTCAGAA TTATTTGATT GGGCGTGCAA ATATACATTC
AGTGGTTTGA TGCCTGAGCA GATACACAAA GATTTAGGGG TTCCAATTTC TGCAATGCCG
TTAGGATGGT CGCATGCAAT GTTTATAATT GCAATTCACG GAGATTTTGA CATATTGATT
CCATAA
|
|---|
| Protein sequence | MVGIIGNGNI LAKIDDSGSI EYMFYPSLGY EKHIFDASFA IFNHGLKWAW DNNWDINQSY
VKDTNILRTT YECNEFLMES RDYIPISHNI IIKQISISNK TDETQDLKLF FYENLRMGEI
PKENTVQFIK DHQTILKYDG TYSTCIGSDK KIDSYQCGVR SSDKSALLDI ANGLLKEYSS
SSGLITDSAI SWNLKLLPGQ KQSVSVYIII NQYNGDYQKL MEIMDSIKVV IDNHEDFYQL
TNSYWKNLLE TTISKLSANE LNRVMMCEDL CKRSFLTLLL LCDRGGGIMA SPSLYPDYRH
VWCRDGGYIA VALSLCGQSS IVEKYFEWCR KTQNEDGSWV QSYYINGIPR LTAIQIDQVG
TTLWAALIHY RKSDNEKFLK KNWAMIKKAA DYLSNVAVTL YPSYDLWEEK YGVFTYTLGS
VYGGLKSAIE IAKILEENSE SIEKWQNASE FLKEEVVEKI YLNDKNRFLK ALHPKDEALD
SSILGISFPF NLVNADDPKM VATADQIESA FNYKVGGIGR YPEDVYFGGN PWIINTLWLY
MYYEMLVYTL SKNKSIKKEI LENYREKCSE LFDWACKYTF SGLMPEQIHK DLGVPISAMP
LGWSHAMFII AIHGDFDILI P
|
|---|
| |