Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0522 |
Symbol | sdhA |
ID | 5328694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 529678 |
End bp | 531297 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640793042 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001329741 |
Protein GI | 150402447 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAACAG ATGTGCTCAT AATTGGCGGT GGCGGTGCTG CAGCAAGGGC AGCAATAGAA TGCGGGCAGA AAAATGTTGT AATTGCTTCA AAAGGCCTTT TTGGAAAAAG TGGATGTACT GTGATGGCTG AAGGTGGGTA CAATGCAGTA TTAAATCCCG AAGATTCGTT TGAAAAGCAT TATTCCGATA CGATGAAGGG CGGTGGATAC ATAAACAATA AAAAACTCGT AGAAGTTTTG ATAAAAAACG CACCAAAAGA ATTTAAGAAC TTGGAAAAAT TTGGATGTAT TTTTGATAGA TCGGAAAAAG CAGAATTTGC ACAAAGGCCG TTTGGCGGAC AGAGTTTTAA TAGAACCTGT TACAGTGGAG ACAGAACTGG CCACGAGATA ATTGCAGGAT TAATGGAATA TCTGAATAAA TTTGAGCGCA TAAAAATTTT AGAAGACACA ATGGCAATAA AATTAATTGT CGATGAAGTT GAAGAGAACG GAAAAAAACT CAAAAAATGT TTTGGGGCAG TATTTTTAGA TTTATTAAAT GGCGATATTT ACCCAGTATA TGCAAAATCT ACAATTCTTG CAACAGGTGG TGCTGGACAG ATTTATCCGA TAACATCAAA TCCGAAACAA AAAGTTGGGG ATGGTTTTGC AATTGCTTAT CGTGAAGGGG TCGAACTAGT TGACATGGAA ATGGTTCAGT TTCACCCGAC AGGAATGCTT GGAACTGGAA TTTTGGTAAC CGAGGCTGTA AGGGGCGAAG GCGGAATTTT ATACAATAAA AATAAAGAAA GATTCATGAA AAACTACGAT TCAAAAAGAA TGGAATTGTC AACAAGGGAT GTAGTTGCTA AAGCGATATA TAACGAGATT CAGGAAGGAA GGGGCATTGA TGGTGCAGTT TATTTAGATG TAACACATCT GGATCCCGAA ATTATCGAAG AAAAGCTTGA AACAATGTTT TCACAATTTT TGATGGTTGG AGTGGATATT AGAAAAGAGC CGATGAAAGT AGCTCCAACA GCACACCACT TTATGGGCGG AATTAAAATA AATGAAAATT GTGAAACAAA TATTTCTGGA TTATTCGCAT GTGGGGAAGT TGCAGGTGGA ATTCACGGTG CAAACAGGCT TGGTGGAAAT GCACTTGCTG ATACGCAAGT TTTTGGAGCA ATTGCTGGAA AAAATGCTTT AAATTACGCT GAAATGGAAC TTGACATTTC AAAAGTATAT GCTTTTGTTG AAGAATATAT CCAAGACTTG AAAAATACAT TTAAAGATTC AAATTCTGGA GATAACGTAT ATTCATTAAT TGATGAATTA AAAAAGACAA TGTGGGATTT TGTTTCTATT TCAAGAGACG AAATTGGATT AAACGCTGCA CTTGAAAAAA TAAATGAAAT AAACGGAAAA GCGGTTTCAA TAAATGGAAT AGTGGACTTT TCAAAAAAGT TGGAACTTGA AAACATGATT TTAGTTTCTG AAATTGTAAT AAATTCTGCC TTACTTAGAA CAGAATCAAG GGGCGCACAT TTTAGAAACG ATTATCCAAA AACCAATGAC GGGTGTACTG GAAACTTTGT GGCATGTGAT GGAAAAATTA AATTTGAAAA AATTGAATAA
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Protein sequence | MITDVLIIGG GGAAARAAIE CGQKNVVIAS KGLFGKSGCT VMAEGGYNAV LNPEDSFEKH YSDTMKGGGY INNKKLVEVL IKNAPKEFKN LEKFGCIFDR SEKAEFAQRP FGGQSFNRTC YSGDRTGHEI IAGLMEYLNK FERIKILEDT MAIKLIVDEV EENGKKLKKC FGAVFLDLLN GDIYPVYAKS TILATGGAGQ IYPITSNPKQ KVGDGFAIAY REGVELVDME MVQFHPTGML GTGILVTEAV RGEGGILYNK NKERFMKNYD SKRMELSTRD VVAKAIYNEI QEGRGIDGAV YLDVTHLDPE IIEEKLETMF SQFLMVGVDI RKEPMKVAPT AHHFMGGIKI NENCETNISG LFACGEVAGG IHGANRLGGN ALADTQVFGA IAGKNALNYA EMELDISKVY AFVEEYIQDL KNTFKDSNSG DNVYSLIDEL KKTMWDFVSI SRDEIGLNAA LEKINEINGK AVSINGIVDF SKKLELENMI LVSEIVINSA LLRTESRGAH FRNDYPKTND GCTGNFVACD GKIKFEKIE
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