Gene MmarC7_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0520 
Symbol 
ID5328692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp527164 
End bp528843 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content37% 
IMG OID640793040 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001329739 
Protein GI150402445 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCTT TAGTCAATGA ATATGTTAAA AAAACGGAAT TTGAGTCATA CGAAGATTTT 
GTGGAAACTT TTAAGATAGA TGTTCCTGAA AACTTTAACT TTGCTTATGA TATTGTTGAT
GAATACGCAA AAATTGCACC GGAAAAGATT GCAATCGTAT GGTGTGATGA TAATAACGAT
GAAAAAATCT TTACATTTAA TGATATGAAA AAATACAGTG ACAAAGCAGC TAATTTCTTT
TTAAAACACG GAATTAAAAA GGGAGACACT GTAATGCTCA CATTAAAGAG TAGGTATGAA
TTCTGGTTTT GTATGCTTGG ACTTCATAAA ATTGGGGCTG TCGCAATTCC TGCAACGCAC
ATGCTCACAA CAAAAGATAT TGTTTACAGA ATTGAAAAAG CAGGCTTAAA AATGATAGTT
TGCATCGGTG AAAATGGGGT TCCTGAATAT GTTGACGAAG CAGTTTCTGA AATTAATTCA
GACGTTTTAA AAGCATGTGT TGTAAATTTA AATCAAAAAA ATTGGATTGA TTTTTCAAAA
GAATTGGGGG AATCATCAGA AGAATTTACA AGGCCTGTTG GAGAAATGGA TACTAAAAAT
AACGATGTAT TGGTTGCATA CTTTTCATCA GGAACTACTG GATATCCAAA ATTGATTCAG
CACGATCATG AATATCCTTT AGGGCATATT ACAACTGCAA AATACTGGCA AAACGTTGAA
GACGATGGAC TTCACTATAC TGTTGCAGAC AGTGGCTGGG CAAAGTGTAT CTGGGGAAAA
CTCTACGGTC AATGGATTGC AGGAACTGCT GTATTCGTTT ACGATTATGA CAGATTCGAT
GCAGGAAATA TGCTTGAAAA AATTGCAAAA TATAAAGTTA CAACGTTTTG TGCACCGCCT
ACAATTTACC GGTTCATGAT CAAGCAGGAT ATCTCAAAAG CAGACTTTTC AAGTGTGCAC
TATGCAGTAA CTGCTGGAGA ACCATTAAAT CCAGAAGTAT ATAATAAATT TTTAGAGTTT
ACGGGACTTA GGTTAATGGA AGGATTTGGG CAGACCGAAA CGGTTGTATC TGTTGCAAAC
TTCCCTTGGA TGGATCCAAA ACCCGGATCA ATGGGAAAAC CCGTACCTAT TTTTGATTTA
ATGATAAAAG GGCCGGATGG AAAAGAGTGC GATGTTGGTG AAGAAGGAGA ACTCGTATTC
AAAACAAAAG ATGGAAAACC ACTCGGTCTT TTCTCAGGAT ACTTTAAAGA CCCCGAAAGA
ACCAAAAAAT CATGGTACGA TGGTTATTAC CACACAGGGG ACACTGCATG GAAAGACGAA
GATGGATTCC TCTGGTTTGT TGGGAGAAAC GACGATTTAA TCAAAAGTTC TGGTTACAGA
ATCGGTCCTT TCGAAGTAGA GAGTGCACTT ATTTCTCATC CTGCAGTGCT TGAATGCGCA
ATAACTGGAG TTCCTGACCC TATAAGGGGC CAGATAGTTA AAGCTACAAT TGTTTTAACT
CCTGATTACG AAGCAAGCGA AGAACTCAAA AAAGAACTTC AGGATCACGT TAAACACAAC
ACTGCACCCT ACAAATATCC ACGGGCTATC GATTTTGTAA AAGAGCTCCC AAAAACAATC
AGTGGTAAAA TTAGGCGCGT AGAAATCCGG GAAAAGGATG AAGAAAAAAG TAATAATTAA
 
Protein sequence
MVSLVNEYVK KTEFESYEDF VETFKIDVPE NFNFAYDIVD EYAKIAPEKI AIVWCDDNND 
EKIFTFNDMK KYSDKAANFF LKHGIKKGDT VMLTLKSRYE FWFCMLGLHK IGAVAIPATH
MLTTKDIVYR IEKAGLKMIV CIGENGVPEY VDEAVSEINS DVLKACVVNL NQKNWIDFSK
ELGESSEEFT RPVGEMDTKN NDVLVAYFSS GTTGYPKLIQ HDHEYPLGHI TTAKYWQNVE
DDGLHYTVAD SGWAKCIWGK LYGQWIAGTA VFVYDYDRFD AGNMLEKIAK YKVTTFCAPP
TIYRFMIKQD ISKADFSSVH YAVTAGEPLN PEVYNKFLEF TGLRLMEGFG QTETVVSVAN
FPWMDPKPGS MGKPVPIFDL MIKGPDGKEC DVGEEGELVF KTKDGKPLGL FSGYFKDPER
TKKSWYDGYY HTGDTAWKDE DGFLWFVGRN DDLIKSSGYR IGPFEVESAL ISHPAVLECA
ITGVPDPIRG QIVKATIVLT PDYEASEELK KELQDHVKHN TAPYKYPRAI DFVKELPKTI
SGKIRRVEIR EKDEEKSNN