| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0512 |
|---|
| Symbol | |
|---|
| ID | 5328711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 517770 |
|---|
| End bp | 519665 |
|---|
| Gene Length | 1896 bp |
|---|
| Protein Length | 631 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640793032 |
|---|
| Product | glutamyl-tRNA(Gln) amidotransferase subunit E |
|---|
| Protein accession | YP_001329731 |
|---|
| Protein GI | 150402437 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2511] Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) |
|---|
| TIGRFAM ID | [TIGR00134] glutamyl-tRNA(Gln) amidotransferase, subunit E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATG ATTATGAAAA ACTTGGATTG AAAGTCGGAC TTGAGATACA CCAGCAGTTA
AACACTAAAA GAAAACTTTT CTGTAACTGC CCTACAAAAA TAAGGGATGA CGAACCTCAC
GGGGAAATTG AACGGGTTTT GAGACCATCT CAAAGTGAAA TGGGCCACGT TGATAAGGCA
GCATTGCTCG AATCAAAAAA GGAAAAGAAG TTTATTTACC AGTACTACAA CGATACAACA
TGTCTCGTAG AACTTGATGA CGAACCACCT CACGACGTTG CTCCTGAAGC AGTGGATACT
GCATTAGAAG TTTCAACACT GATGAACATG AAAATGGCGG ATGAAATTCA AGTCATGAGA
AAAATGGTTA TTGATGGTTC AAATACATCC GGATTTCAAA GAACAATGTT TGTGTCCCAA
GAAGGATTTA TTGAAACAGA CTATGGAAAT ATTGGGGTTA CAAGCATTTG TTTAGAAGAA
GATGCATGTA AAAAAATTGA AGATGGAAAA GATTACACGA AGTACTGTGT TGATAGACTT
GGAATTCCGC TTTTAGAGAT TACAACTGAA CCAGATATCA CATCTCCAAA AATGGGTAAA
GAAGCTGCAA GAAGGATCGG AACGATTTTA AGGGCAACTG GAAAGGTTAA AAGGGGTCTA
GGTACAATCC GTCAGGATGT AAATATTTCA ATTAAAGGCG GTGCAAGAAT TGAAGTTAAG
GGGGTTCAAA ACCTTGATTT AATTGAAAAA ATCATCGAAA ACGAAGTTAC AAGGCAAATA
AGTTTAAATG AAATTAAAGA AGAACTTTTA AAAAGAAATG CAGAAGTTAT CGATGAAATA
AAAGACATCA CCGAACTTTT AAAAGACACC GAATCAAAAG TTTTGAAAAG TGCACTCAAA
AATAAAGGTG TAATTAAAGC AATTTTATTA AACGGATTTT CAGGAATGAT TGGAAGGGAA
GTTCAGCCTG GAAGAAGGCT TGGAACAGAA TTTTCAGATC GTGGAAAAGT TCTTGGTGGG
GTTGGCGGAT TATTCCACAC CGATGAACTT CCAAAATACG GAATTACCGA AGAAGAAGTT
ATAAAATTAA AAGAATTCAT GAGTTGTGGC GAAAATGATG CTGTAATTTT GGTTGCGGAT
AAGAAAAACA AAGTTGAAAG AGCACTCAAC GCAGTAATCG AAAGGGCAAA AGAATCAATG
ATCGGAATTC CTGAAGAAAC GAGAAAAGCA CTCGATGATG GAAATACATC ATACTTAAGG
CCACTTCCTG GTGCTGCAAG GATGTATCCT GAAACAGATG TTCCAACAAT TACAATCACG
GAAGAAAAAC TCGAAATGGT TAGGAATAAC CTTCCAGAAA TGCCTGAAGA AAAACTCGTA
AGGTTTGTAA ACGAGTACGA GTTAAACGAA GATCTTGCAA AACAGATGGT AATGTCATAC
CATGTTGATT TGTTTGAAAG TCTGGCAAAA AAATATTCAA AAATTAAGCC TACACTAATT
GCGACAACTC TCGAAGCTAC ATTAAAAGAA ATAAAAAGAG AAGGGCTCGA AACTGAGGTA
TTGACCGAAG AACATCTTGA TGAAGTTTTC AAAGGACTTT CAGAAGATAA AATGTCAAAA
GAAGCAGTTC CTGATGTTAT AAAAGGATTT ATCGAAAACC CTGCAAAGAA CCTCGATGAA
GTTTTGGAAA TTAAGGGAAT GTCTTCAATG TCTGTTGAAG AAGTAGAATC AATAATCGAA
GATATAATTA ATCAAAACAT TTCAACAGTA AATGAAAAAG GAATGGGTGC AATGGGCCTT
TTGATGGGAA GATGTATGGC ACAGCTTAGG GGAAACGCTG ACGGGAAACT GATAAACACA
ACATTACAGA AAAAATTAAA AGAAAAAGTT CAGTAA
|
|---|
| Protein sequence | MDYDYEKLGL KVGLEIHQQL NTKRKLFCNC PTKIRDDEPH GEIERVLRPS QSEMGHVDKA
ALLESKKEKK FIYQYYNDTT CLVELDDEPP HDVAPEAVDT ALEVSTLMNM KMADEIQVMR
KMVIDGSNTS GFQRTMFVSQ EGFIETDYGN IGVTSICLEE DACKKIEDGK DYTKYCVDRL
GIPLLEITTE PDITSPKMGK EAARRIGTIL RATGKVKRGL GTIRQDVNIS IKGGARIEVK
GVQNLDLIEK IIENEVTRQI SLNEIKEELL KRNAEVIDEI KDITELLKDT ESKVLKSALK
NKGVIKAILL NGFSGMIGRE VQPGRRLGTE FSDRGKVLGG VGGLFHTDEL PKYGITEEEV
IKLKEFMSCG ENDAVILVAD KKNKVERALN AVIERAKESM IGIPEETRKA LDDGNTSYLR
PLPGAARMYP ETDVPTITIT EEKLEMVRNN LPEMPEEKLV RFVNEYELNE DLAKQMVMSY
HVDLFESLAK KYSKIKPTLI ATTLEATLKE IKREGLETEV LTEEHLDEVF KGLSEDKMSK
EAVPDVIKGF IENPAKNLDE VLEIKGMSSM SVEEVESIIE DIINQNISTV NEKGMGAMGL
LMGRCMAQLR GNADGKLINT TLQKKLKEKV Q
|
|---|
| |