| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0440 |
|---|
| Symbol | |
|---|
| ID | 5328069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 445409 |
|---|
| End bp | 449947 |
|---|
| Gene Length | 4539 bp |
|---|
| Protein Length | 1512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640792961 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001329660 |
|---|
| Protein GI | 150402366 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATAAAA AATCAGGACA AGCACTATTC TTGGTACTTG TTATGGTTCT CTCAAACATG
GGAGGGGTTA TGGGTATTGT GGATACCACT ATAGGTACTT GCCCTTGTAA TGGCGAAAGT
GGTTCAGGTA CTATAATCAT AGACTGTAAC TGTACTGATG ATAGATGTTT TAACATTAGT
TTTACTTCAC CAGAATGCGC ATCCACGTGG TGTGATGAAG TACCGATTAC CGGAACAATC
GTACCATGCG TTGATGATGA ATTGGGATGT GCCGACTATA TTAAAGTATA TTATAAACAA
TTAGATACCG ACTGCGAATG CTGTGAATGT TACTGCGAAT GCGGTAATCC TGAAGCAGAT
GATGGAGAAG GATGGAGCGT TGTAGGTGTC GATGACACTT TAAACGGAAG CTGTCCTGCA
GTATGGGGTT TAGACTGGCC TATCTGTTGT GAAACTGATG GCTGTTACGT ATTAAGGGCA
GTACTCTATG ATGGCTGTGA TATGCAAGTA GGATGCCCTT CAGAGCCTGT ATTCATATGC
TTTGATAAAG GGGTTGCTGT AAGTTTAGCA CTTCCAGAAT CACTTTCCTG CGGAGGAACT
ATTGCAGGAT GTTTAAATGA ATCCTGCGAT TGCGTTGACT ATATTTTAAT AACTGCAAAC
TACACTGGAG AAGGCTCTTG TTTGAGGTGC CCTCAGGAAG ATTGTATGCC TACAATGACA
TACATTGTCG ATAGAGAAGA CTTTGAAGAA GCAATGTGCT GCGACTATAT CTTTGACGTA
TTATTTAACA ACCTTTACTG CGGAGGATGC TACGAAATAA CTGCTACACC TTACGCAGAC
TGCACCGATG ACTGTACATA TAATGGTGTA CAGATAGGTG AAGAATATGT AGGATATCTC
GAAATTATAA GAGAAGATGT ATGCTTTGAA ATAGAATGCC CTGCACCAGT TACACCAGAA
TGTGGTATGA CACTTTGTGG GCCAATCACT TTTTCAGGTA TATTAAATGA TCCTTGTAAT
GCTGCACAGT GCATTGAATT TTATGCAGTA AAAACAGGAA ACTTCACACT TTGTGACGGT
GCATGTTGTG CACCAACATG CAATGCATGC GATGGGGAAG AAATTGTAAC ACTCGAGGTA
GAAACCGAAG AGTTGGGTGA AAATATCTGT CCAAACTGCG GTGCAGAAAT GGAACCTATT
GTATGTGGTG CATGCGGTGG AATAGTTACA GGATATACCT GTCCAAACTG TGGATATCCA
TCAAATGAAG ACACAGGAAC AGGCGTTTCA GAATGTATCT GTGGACAGCC TGAAGACCAC
GATAACTACA TTTGTAAATG TGCTTTATAT GATATGGAAT ACCTTGGATG TACATATGCT
ACAATGCCAA ACTGGACATT TACAACAAGC GAATTTTGTG ATTTTGATTC AGGATGCTAC
GAAGTATACG CTGTAGTTGT AGACAAATGT GACTGCTACT ACGAATACAG ATACGACACC
GTCGAGTTTG CATACTGCAA CGAAAGAAAC TTGACAATCG AACTTGAAGA TTGCGTATGC
GAAGGATGCT GGATGGGAAA TAATTACTAT AAAGTATATG ACATTCAGAG TGGAACAGTT
ACTGCATTTG GTAATATAAC AGTTCCAACT TGCTGGATAA ATTACCCTGA ATATGTAGCC
CTCGAATATG ACTTTGGACA CAAAGTGTAT GTCAATGACT TTAGATGCCC AACTTCATAC
ATTGAATGGG ACGATGAATG GAAAGATGCA AGCTGTACAG AAGGTTCGAT AACATGGACC
TACAATGGAG CATGCCTAAC ATCAGGAACC TGGGAAACTG ACTGGTGTAC TCCAGAAGAT
ATTCAGGACG AAGAAGGAAG ATACGTAAGA ATAAGGGGTG TTGCAGTAGG AGGTTGTGGA
GAATTTGAAT CTGAACCTAT TGGAACAAGC ATTTACAACG ACTTCGAGAT TAATATATTT
GATCCTTGCG AAGGAAATAC GATATACAAC GGTAAAGTCA TAAGAGGTTT CGTCTGGATA
GATACTGACT GTTGCGGCGG TTGGTGCTGG CCAGGATGTA ATAATTGGCC AGATGCTGAT
GAAGTATGCC TGCCTGACCA CGTAGACCTC TACTGGAGAG AATATGGTAC CGAAAACTGG
TTGCCAATGG ACAGTGCATT TTTGAGCTGG GAAAACAGTG AACAGTACAT TGACTTTACA
GATTATGGAA TAGATCCATT ATATCCAAAC TTACCGGATC TCTGCTGGTA TGACAACTAT
GCATACTGGG ATGTAACATG GACTTCATGC ATGGTAAACT GTATAGATAA TGGACATTAC
GAAATAAAAG CAGTAGTAGA ACCATGTGAA AATGATGAAT GTGGAACATT CGAACGTGCA
GAATATGTAA TGGATATTTA TGTAGATGAC ACATCAGGTG TTACAATCTC AAAACCAATT
GATGGACAAA CCGTATGCGA TAACTTCTGG GTATACGGTA CAGCAGTCGG TGCTGGAGTT
TCAAATGTAG ACTTCTATGT ATCTGAAGAT AACGCATCTT GGATGCTTTA CAAAGAAGAT
ATCGATGTAA ATGTAGAAGA TGGAAGATGG AAAGCTCCGC TTAACACATG CTGCTTTGAA
GATGGACCAT TATACTTAAA AGCTGTAGTT ACTGGCCCAT GTGACCAGAG CGAAAGCAAT
GTAATGGTTA ATGTAAACAA TGCTATCGAA ATCGATCTAA CATGTCCTGA CTGTTGCGTA
TACTACGTAA CAGGAGATAA AGCACCTATA AGGGGAACTT TAACAGGATG TTCAGTAGAT
GAAAGAGTAG AAAGCGTAAA AGTATACTCC ACAAGTCTCG GACTTATTGG GGAAGTACCT
GCTGAAGATT TCAGATACAT TGGTGACGGT ACCTGGGAAT GGGGACTTTG CTTTAACCCA
TGTGTATTGA ATGGAGCATC AACACAAATA TATGCTGAAG CAGAGTACTC TTGCGGAAAT
ACATACACCA CAATAACAAC TGGATACGAA TGCATGCAGC ACGACCCAGA TCTTGTAATA
CTAGAGATTA CTGGTCCGGG AGCTGAATCT ACAGTTGCAG GAACTGTTAC AATAGAAGGT
ACTGTAGAAT GTGCATGCTT AGACTACCTT GAATTTGAAT ACAGAGAAAT ATGCGAACCT
ACTGGCCTAC CACTTGGAGA CTGGACTTCA TTCCCAGATG TCTCAACAAT ATACCTTCCT
ACAACATGTG ACTGCGATGG TATGATCTGG ACAATCGATC TCAATACTTG CGGAATGGAC
GGCCTTTATG AAATACAAGT TTCAGCATAC GGCTGGCCAT GTGAAGGCGC AATCGCATCA
GACACAAGTA TGATCGATGT GGACAATAAT ATAGGAATTA CCCTAGACAC TCCTGCAATA
AACTCAGGAG TTAAAAACGG TACAATAGAA GTTGGAGGTA CAGTTGAAAA CTGCCCTGTA
ATCGATATTA TCGAATTATG GTACATCGAT GAAGGAATTT CAACCATGAT TTCAGATGAA
ATTACTTGCA GTGATGGACT CTGGAGCTAC ATGTGGGATA CCACAACATT AGAAGATGGA
TGCTACTGCC TCGTTGCTTA CGCATTTGAC GAAGATTGCG ATAACATGGC TTCAACCAAA
ACAAGAGCAG TATGTATCAA TAATAGTGGA TTACCTCCAT ACTACGAAAA CGAAACTCCT
GAAATCGAAA GAGAGTGTGT ATCAATAGTT ACTGCATGCT ATTTACCATG CACTACGCTA
TACATAACAT TTAATGATAC AGTAAGCATT AACGATTCTT ACGATCCTGC AAGCCCATTA
GATGGATTTG ATATATCTGG TGGAAGCTTT GGAACAGGAG CTTGGATGGA AGAAGATAGC
TCAAATGACC ATAGACTTAT AGTACACTTA GGTACCGGCC ATACAATTGC TTCGGGAACA
AGTGGAATAT CAATCAAAGA AAACCAGACT GCAATACTTG GCCCACACGG CTTCCCAATA
GTAGACTGCA GTGCATTATT AAAAGGAATT TCAGTACCTG AAAGTTCAGG AACATCAGAA
AGTTCAGGAA CAATCGAACT TGAAAACTTG AAAATGTTTT CAGTACCTGG AAAAGTAGAT
ACTGAACAGA TGATTATAGA TGCAGGTATT ACAGAAGGTT CCTTTGTAAA ATACACTAAC
GGAAGATGGG AACAAGTTAC GGAATTCAAA CCATTAGAAG GTTACGTATA CATCGGTAAC
TTTGAAGGAG ATATGCCGAT ATACATAGAA GACTTATTAC CTACAGATAC CCCACCTGAA
ATACAATTAG CTTCAGGATG GAACTTAGTT GGTGTAAATA CTTACGGTGG ATCATTCGAC
ACAGTAGCAT GTGATGATTT CATTGGAAGT GCACCAATTA GCAAATTACT TGAATTCAGC
TCCAGTGGAT GGATAAAATT AACTGGATCC AGCCCACTTG TGCCAACTAA TGCATATTGG
GCATATGCTG ACTCAAGCTG TGACTTTAGT GGACAGTAA
|
|---|
| Protein sequence | MNKKSGQALF LVLVMVLSNM GGVMGIVDTT IGTCPCNGES GSGTIIIDCN CTDDRCFNIS
FTSPECASTW CDEVPITGTI VPCVDDELGC ADYIKVYYKQ LDTDCECCEC YCECGNPEAD
DGEGWSVVGV DDTLNGSCPA VWGLDWPICC ETDGCYVLRA VLYDGCDMQV GCPSEPVFIC
FDKGVAVSLA LPESLSCGGT IAGCLNESCD CVDYILITAN YTGEGSCLRC PQEDCMPTMT
YIVDREDFEE AMCCDYIFDV LFNNLYCGGC YEITATPYAD CTDDCTYNGV QIGEEYVGYL
EIIREDVCFE IECPAPVTPE CGMTLCGPIT FSGILNDPCN AAQCIEFYAV KTGNFTLCDG
ACCAPTCNAC DGEEIVTLEV ETEELGENIC PNCGAEMEPI VCGACGGIVT GYTCPNCGYP
SNEDTGTGVS ECICGQPEDH DNYICKCALY DMEYLGCTYA TMPNWTFTTS EFCDFDSGCY
EVYAVVVDKC DCYYEYRYDT VEFAYCNERN LTIELEDCVC EGCWMGNNYY KVYDIQSGTV
TAFGNITVPT CWINYPEYVA LEYDFGHKVY VNDFRCPTSY IEWDDEWKDA SCTEGSITWT
YNGACLTSGT WETDWCTPED IQDEEGRYVR IRGVAVGGCG EFESEPIGTS IYNDFEINIF
DPCEGNTIYN GKVIRGFVWI DTDCCGGWCW PGCNNWPDAD EVCLPDHVDL YWREYGTENW
LPMDSAFLSW ENSEQYIDFT DYGIDPLYPN LPDLCWYDNY AYWDVTWTSC MVNCIDNGHY
EIKAVVEPCE NDECGTFERA EYVMDIYVDD TSGVTISKPI DGQTVCDNFW VYGTAVGAGV
SNVDFYVSED NASWMLYKED IDVNVEDGRW KAPLNTCCFE DGPLYLKAVV TGPCDQSESN
VMVNVNNAIE IDLTCPDCCV YYVTGDKAPI RGTLTGCSVD ERVESVKVYS TSLGLIGEVP
AEDFRYIGDG TWEWGLCFNP CVLNGASTQI YAEAEYSCGN TYTTITTGYE CMQHDPDLVI
LEITGPGAES TVAGTVTIEG TVECACLDYL EFEYREICEP TGLPLGDWTS FPDVSTIYLP
TTCDCDGMIW TIDLNTCGMD GLYEIQVSAY GWPCEGAIAS DTSMIDVDNN IGITLDTPAI
NSGVKNGTIE VGGTVENCPV IDIIELWYID EGISTMISDE ITCSDGLWSY MWDTTTLEDG
CYCLVAYAFD EDCDNMASTK TRAVCINNSG LPPYYENETP EIERECVSIV TACYLPCTTL
YITFNDTVSI NDSYDPASPL DGFDISGGSF GTGAWMEEDS SNDHRLIVHL GTGHTIASGT
SGISIKENQT AILGPHGFPI VDCSALLKGI SVPESSGTSE SSGTIELENL KMFSVPGKVD
TEQMIIDAGI TEGSFVKYTN GRWEQVTEFK PLEGYVYIGN FEGDMPIYIE DLLPTDTPPE
IQLASGWNLV GVNTYGGSFD TVACDDFIGS APISKLLEFS SSGWIKLTGS SPLVPTNAYW
AYADSSCDFS GQ
|
|---|
| |