| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0428 |
|---|
| Symbol | |
|---|
| ID | 5328262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 433780 |
|---|
| End bp | 434907 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640792949 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001329648 |
|---|
| Protein GI | 150402354 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTATAAAA AAATAGGTAC GTTAATTATT GCTTCCTTGA TGATTTTAAC AGTCGCAACC
TGCGGTTGTA CTGAATCTAC AAGTAGCACT ACAGTAACTA ATGAAGAAAT AACTACAATT
ACAGTTGTTG ATGCTGCTGG AAGAACCGTT GAGGTTCCAC AAAATCCAGA AAAAATAATT
GCACTAAGTT GTGCATTAAG AGAAGTCGTT TACCTTCAAT CACAAGATAA AGTTGTAGGT
ATCGAATTTA GGGAAGCTGC AAAAAAAACT GATGGAACTT TCCCGTCAGG TTTAGAGCTC
CCATATCTTG CCGCATATCC GGAATTAATG AATTTGACTG TTGTTAACGC AGGAAACACA
GTTAACGTTG AAGAAATTGC AAAACTTCAA CCTGATGTGA TATTTGTTGG AACTTCGGGT
GCAGGTAGTG CAGAAGATAT TCAAGCAAAA ACAGGAATTC CTGTTGTCAT TGTTTACGTT
GCTACAGTTG GAACTGAAGC TCAAAACGAA AAGTACTATG AAACTTTAGA GTTAATGGGT
AAAGTTTTAG GAAAAGAAGA CAGAGCTGAA GAATTAATCT CAATAATCAA AGAATATGAA
GCGGACCTTG CGAACAGAGT AGCAGACATT CCAGATGAAG AAAGACCTAC CGTTTACGTT
GCAGGAAGGC CTTACATGGG AGTTCACGGT CTTGATGGAA CTGACCCACA CTGGCCTTCA
TTTGAACTCT TGAATGCCAA TAACGTAGCT TCAGAAGTAT CAGATGTCAG TGAAGGAATT
TCAATAAACA AAGAACAACT CATTGAATGG GATCCAGAAT ACATTTTCGC AAGTGAATCT
TCAATGAGTC TAATAAATGA CGATTTAAAC GATCCTGCAT ACCAAGGATT GAGTGCAGTT
CAGAATGGAA ACATCTACGG AGTTTTACCA TACTGCTGGT ATTCATTTAA TAAAGAAACA
GGAATTGCAA ACGCTTATTT CGTTGGTAAA ACCATATATC CTGAACAGTT TGAGGATATA
AATATAGAAG AAAAAGCTGA TGAAATATAC GAAAAATTCC TTGGAAAACC AGTTTATTCA
GTACTAGAAA CCCAGTTTCC AGGATATACC AAACTAACCA ATAACTAA
|
|---|
| Protein sequence | MYKKIGTLII ASLMILTVAT CGCTESTSST TVTNEEITTI TVVDAAGRTV EVPQNPEKII
ALSCALREVV YLQSQDKVVG IEFREAAKKT DGTFPSGLEL PYLAAYPELM NLTVVNAGNT
VNVEEIAKLQ PDVIFVGTSG AGSAEDIQAK TGIPVVIVYV ATVGTEAQNE KYYETLELMG
KVLGKEDRAE ELISIIKEYE ADLANRVADI PDEERPTVYV AGRPYMGVHG LDGTDPHWPS
FELLNANNVA SEVSDVSEGI SINKEQLIEW DPEYIFASES SMSLINDDLN DPAYQGLSAV
QNGNIYGVLP YCWYSFNKET GIANAYFVGK TIYPEQFEDI NIEEKADEIY EKFLGKPVYS
VLETQFPGYT KLTNN
|
|---|
| |