| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0386 |
|---|
| Symbol | |
|---|
| ID | 5327839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 397044 |
|---|
| End bp | 398267 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640792907 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001329606 |
|---|
| Protein GI | 150402312 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0426] Uncharacterized flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.458991 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAG ATGCAGTGAA AATTAGCGAA GGAGTCTACT GGGTTGGAAC ATATGACTGG
GATATTCGAT CATATCACGG ATATACCCTA AAAGGAACCA CCTATAACGC TTACCTCGTA
TTTGGGGACG AAAAAGTAGC GTTAATTGAT AACGTTTATC CCGGAACTTC TGCCCAGATG
TGGGGAAGGA TAAAAAATGC TTTCGAAAAG GAAGGAAAAC CACTCAACAT TGATGTGGTT
GTTCAAAACC ACGTTGAAAA AGACCACAGT GGTGCGCTCG TTGAAATTAC CAAAAAGTTT
CCAAATGCCC CAATATACTG TACCGAAGTT GCAGTTGAAG GTTTGAAAAA ACACTATACT
GGACTAAAAG ATGCACCATT TAAAGTTATA AAATCGCTTG AAAGTATTGA TTTAGGCGGA
AAAACTCTTA CATTCTTAGA AGCTCCCCTT TTACACTGGC CTGACAGCAT GTTTACATTT
TATGCTGAAG AAGGCATATT ATTTTCAAAC GATGCATTTG GACAGCACCT GTGCATTACT
AAAAGATTTG ACAATGAAAT TCCAGAAAAT ATTTTAATGG ATGCAAATCA GAAATTCTAC
GCAAATTTAA TTACTCCGCT CTCAAAACTT GTTTTAAAAA AGTTTAAACA AGTTAGCTCA
CTAGGTTTAC TTGAAAAAAT AAAGACGATT GCACCGTCCC ACGGACAGAT CTGGACTGAT
CCAATGAAAG TAATCTCATC ATACCAAAAC TTTGCAACAG GACAGTGCAA AGACAAAGCT
ACAATTGTGT ACGACACAAT GCACTATTCC ACTCAAAAAA TGGCTCATGC GTTTGCAGAA
GGATTAATGT CAGAAGGAAT CGAAGTTGTA ATTTATAATT TACACGTTGA TGAGAGAAGC
GAAATTGTAA AAGATATGCT TGATAGTAAA GCCGTTTTAT TTGGAATTCC AACGATTAAT
GACCAGCCCT ACCCGAGTAT TGGAGATTTG ATGTATTATT TAAGAGGTCT TAGATTTGAT
AGAACAGGAT TTAAGAAATT GGCTTTAACA TTTGGTTCTA TGGGGGGGAG GGGTGGTGCA
ATCGAAAAAA TTGCAAACGA ACTCAGGAAT TCAGGTTTTG ATGTGGTTAA TGAATATGAA
TTATATTATG TTCCAAATGA AGATGAACTT GAAAAATGCT ATTCTCTTGG AAATGAACTT
GGAAAAAGAA TAAAATCTAT TTAA
|
|---|
| Protein sequence | MKADAVKISE GVYWVGTYDW DIRSYHGYTL KGTTYNAYLV FGDEKVALID NVYPGTSAQM
WGRIKNAFEK EGKPLNIDVV VQNHVEKDHS GALVEITKKF PNAPIYCTEV AVEGLKKHYT
GLKDAPFKVI KSLESIDLGG KTLTFLEAPL LHWPDSMFTF YAEEGILFSN DAFGQHLCIT
KRFDNEIPEN ILMDANQKFY ANLITPLSKL VLKKFKQVSS LGLLEKIKTI APSHGQIWTD
PMKVISSYQN FATGQCKDKA TIVYDTMHYS TQKMAHAFAE GLMSEGIEVV IYNLHVDERS
EIVKDMLDSK AVLFGIPTIN DQPYPSIGDL MYYLRGLRFD RTGFKKLALT FGSMGGRGGA
IEKIANELRN SGFDVVNEYE LYYVPNEDEL EKCYSLGNEL GKRIKSI
|
|---|
| |