| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0379 |
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| Symbol | |
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| ID | 5328356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 389994 |
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| End bp | 392135 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640792900 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001329599 |
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| Protein GI | 150402305 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0908299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTT TTCAAAAATT GCAAAAAGAA TTTAATTTAA AAATATTTCA AGTCGAAAAC
ACGGTTAAAT TAATTGATGA AGGAAATACA ATTCCATTTA TTTCAAGATA CAGAAAAGAA
GCAACAGGTT CACTTGATGA CGTTGTTTTG AGGAAATTTT TTGATAGACT GAATTATTTG
AGAAATTTAG AAGATAAAAA AGCCCAGATT ATAAAATTAA TTGACGAACA GGGCAAATTA
ACTGAAGAAT TGAAACAAAA GATTGAAAAA TCTGAACTTT TAACTGAACT CGAAGATATT
TACCGTCCAT TCAGGCCAAA AAGAAAAACA AGGGCGACAA TTGCGGAAAG TAAGGGTTTA
AAACCCCTAT CAGAATTAAT TTTAAAACAG ATTTTAGAAA AACCTATCGA AGAACTTGCA
AAAGAATACA TTAATCCAGA ATTGGAAGTT AATTCAATTG AAGATGCAAT TTCTGGTGCT
AAAGATATTA TTGCAGAAGA AATTTCAGAT AATGCAGATT ACAGAAAGTT TATTCGTGAA
ACTACATTTT CAGAAGGAAT TATTTCTGTA AAAGCAAAAA ATGTGGATGA AAAATCAGTT
TATGAAATGT ATTACGAATA TTCTGAAGCA GTTCATAAAA TTCCAGGACA CAGAATCCTT
GCAATAAATC GAGGGGAATC TGAAAAAGTT TTACAGGTAA AAATCGATGC ACCTGTTGAA
TTTATTCAAG ACCGGATATT TAAAAATATA ATTTTAGAAA ATTCGAAAAC TTCTGAAATT
TTAAAAGAAA CTGTAATTGA CAGCTATAAA AGATTGATTG CGCCATCAAT TGAAAGAGAA
ATAAGAAATA GCCTCACGGA AAAGGCAGAA AACGGTGCAA TTGAAGTATT TTCAAAAAAT
TTAAAGCAAC TGCTACTACA ACCGCCAATA AAAAACAAAA CCGTGCTTGG ATGGGACCCC
GCATTTAGAA CAGGCTGTAA AATTGCAGTA GTTGATGAAA CCGGAAAAGT TCTCGATAAA
ACGGTAGTTT ATCCAACAGA ACCCCACAAT AAAATTGCAG AAACTAAAAA ACAGGTCAAA
GAATTAATAA TAAAACACGA TATCGATGTT GTCGCAATTG GAAATGGAAC TGCTTCGAGA
GAATCTGAAC ATATTGTTTC TGAAATTTTA AAAGAAGTTG TAAAAGACGT CTACTACGTG
ATTGTAAACG AAGCAGGAGC TTCTGTTTAT TCTGCATCCG AACTCGGATC TGACGAATTC
CCAGAATACG ATGTTGGAAT TAGAAGTGCA GTATCAATTG CGAGAAGGCT TCAGGACCCG
TTAGCCGAAC TTGTAAAAAT TGATCCAAAA TCAATTGGTG TTGGACAGTA CCAGCATGAT
ATGAACCAGA AAAAATTATC TGAAAGTTTA ACAGGAGTTG TTGAATCATC TGTAAACTCA
GTAGGTGTTG ATTTAAATAC CGCGTCGGTT TCACTTCTTA ATTATGTATC AGGAATCAAT
ATTGGAATTG CAAAAAATAT TGTAGAATAC CGACTCGAAA ATGGAAAATT TGAATCCCGA
AAAGAACTTT TAAAGGTAAA TAAACTTGGT AAAAAAGCAT TTGAACAGTG CGCAGGGTTT
TTAAGAATTC CTGAAGGTAA AAATTTATTT GATAACACAG GAGTCCACCC AGAATCTTAC
AAAATTACAG AAAATTTACT TAATGAACTA AATATCTCGA TAAAAGATAT TAAAGAAAAG
AAAGTTGATA AAATTTCTGA AAAAGTCGAT ATCGAAAAAT TGGCCGAAAA ATTAAATTGT
GGAGTTCCTA CACTTGAAGA TATAATTAAA GAACTTGAAA AACCCGGACG AGATCCAAGA
GAAGACCTTC CAAAACCAGT TTTAAGAAGC GATGTTTTGG AACTTGAAGA TTTAAAAGAA
GGAATGATTC TAAAAGGCAC TGTAAGAAAT ATTGTTGATT TCGGAGCTTT TATTGATATA
GGGGTTCACC ACGATGGATT AGCACATATT TCAGAAATTT CCGACAGATT TATAAAGCAT
CCCCTTGATG TAATCTCAGT TGGAGATATC GTTGATGTTA TGGTAATGGA CATCGATTTT
GATAAAAAAA GGGTTTCTCT TTCAATAAAA CGTGCAAAAT AA
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| Protein sequence | MDIFQKLQKE FNLKIFQVEN TVKLIDEGNT IPFISRYRKE ATGSLDDVVL RKFFDRLNYL
RNLEDKKAQI IKLIDEQGKL TEELKQKIEK SELLTELEDI YRPFRPKRKT RATIAESKGL
KPLSELILKQ ILEKPIEELA KEYINPELEV NSIEDAISGA KDIIAEEISD NADYRKFIRE
TTFSEGIISV KAKNVDEKSV YEMYYEYSEA VHKIPGHRIL AINRGESEKV LQVKIDAPVE
FIQDRIFKNI ILENSKTSEI LKETVIDSYK RLIAPSIERE IRNSLTEKAE NGAIEVFSKN
LKQLLLQPPI KNKTVLGWDP AFRTGCKIAV VDETGKVLDK TVVYPTEPHN KIAETKKQVK
ELIIKHDIDV VAIGNGTASR ESEHIVSEIL KEVVKDVYYV IVNEAGASVY SASELGSDEF
PEYDVGIRSA VSIARRLQDP LAELVKIDPK SIGVGQYQHD MNQKKLSESL TGVVESSVNS
VGVDLNTASV SLLNYVSGIN IGIAKNIVEY RLENGKFESR KELLKVNKLG KKAFEQCAGF
LRIPEGKNLF DNTGVHPESY KITENLLNEL NISIKDIKEK KVDKISEKVD IEKLAEKLNC
GVPTLEDIIK ELEKPGRDPR EDLPKPVLRS DVLELEDLKE GMILKGTVRN IVDFGAFIDI
GVHHDGLAHI SEISDRFIKH PLDVISVGDI VDVMVMDIDF DKKRVSLSIK RAK
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