Gene MmarC7_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0378 
Symbol 
ID5328355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp389145 
End bp389942 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content32% 
IMG OID640792899 
ProductNOL1/NOP2/sun family RNA methylase 
Protein accessionYP_001329598 
Protein GI150402304 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00446] NOL1/NOP2/sun family putative RNA methylase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0306061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAATT TACAATTTAT AAGGACAAAC ACGTTAAAAA TATCTTCTGA AGACTTGAAA 
AAACGATTAG AAGAAAAAGG AGTAGTTTTA GAAGATACAT TTTTAGATTA CGTATTTAGA
GTAGTAAAAT CGCCATTTTC CATGGGCTCA ACTCCAGAAT ACCTTTTGGG ATACTACTTT
TTACAGAGTA TTTCATCAAT AATTCCTTCA ATAACACTCA ATCCATCAAA AGATGACGAT
GTACTCGATA TGTGTGCAGC ACCAGGTGGA AAAACCACGC ACCTTGCACA ATTAATGGAA
AACGAAGGTT CGATTCTTGC TGTTGAAATA AATAAAAATA GATTGAAAAG TTTAAGGTCA
AATATAAACA GGATGGGCTT TAAAAATACA TTGATGATAA ACACAAACGC AGTTAACCTC
GATAAAAAGT TAAGATTCGA TAAAATTCTT TTAGATGCGC CATGTACTGG AAACGAGATA
AAAGACTCCA ATCGGGTAAA AACAAAACGA GATATTTTAT TCTGCGCAAA AAGACAGGTT
GAATTATTCA GAACTGCAAT TGAAGTTTTA AAAGACGGCG GTGAGTTAGT ATACAGTACT
TGCTCCCCAG AAATTGAAGA AGACGAAGAT ATTGTTCGAT ATATTTTGAA AAACAATAAA
AATATAGAAC TTATCGAATT AAATGTAGAC GATTTCCTAG GAATAAACAT GATTGAAGGC
GAAGTTAAAG GAACTTTAAA GGTAATTCCG CCAAATGAAC CATTTTTCAT TGCAAAATTT
AGAAAAGTTA AAAATTAA
 
Protein sequence
MENLQFIRTN TLKISSEDLK KRLEEKGVVL EDTFLDYVFR VVKSPFSMGS TPEYLLGYYF 
LQSISSIIPS ITLNPSKDDD VLDMCAAPGG KTTHLAQLME NEGSILAVEI NKNRLKSLRS
NINRMGFKNT LMINTNAVNL DKKLRFDKIL LDAPCTGNEI KDSNRVKTKR DILFCAKRQV
ELFRTAIEVL KDGGELVYST CSPEIEEDED IVRYILKNNK NIELIELNVD DFLGINMIEG
EVKGTLKVIP PNEPFFIAKF RKVKN