| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0361 |
|---|
| Symbol | |
|---|
| ID | 5328828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 372136 |
|---|
| End bp | 373245 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640792882 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001329581 |
|---|
| Protein GI | 150402287 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2237] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.168071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00242674 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCAA TAAAGGATAT CGGCAAAGAT TATAACGTTC CCGAAGATAA AAAGTATCTT
GTTATTGTCG TCGACATGGA TGACGATGTC GGAAGAAAAG CAAACATCAG GACTCCTATT
TTAAGTAGGG AAGATAATAT CAATGCAGCT GTGAGGCTCG GATTGACTGA TCCTGGAGAT
AGTGACGTAA ACTCCATGCT CGGTGGAGTT CAGCACTACG ACCACCTAAA AAAAGAAGGA
AAAGACGTTG AAATTGCAAC AATTTCTGGA GATATCGATA TCGAATCAGA AGTCTGTGCA
ATTAAAATTA AGGAACAGAT TGATTTTTTA ATTTACCTTT ACGAGCCTAA TTTCATATAT
CTGGTTTCGG ATGGAAAAGA AGATGAAATG GTTTTAAAAT ATCTGGAATT AAAGGATATT
TTTGTCTGGA AAAAAAGAAT TGTAATTAAA CAAAACGAAT CTCTCGAATC AACTTACTAC
CTTATGCAAG AATTTATAAA AAAGACAATG TCGCAGTACA TTCCTTTAAT ATTTACATCA
ATTGGATTTG CAATGATTTT ATATGCGATA TTTTCAGATC TTGGTTGGAG AATAATTGCA
GGACTTATTG GTATTTACAT TTTGTCTGAG GGTGTTGGAT TAGTTGAATC TATTAAAAAA
ACCCTCAATG AAAGTAAAAA GGGACTTGAA GTTGGAAAAT TATCTCCTTT TGGAAATATT
TTGGGATTTT TGATACTTCT TGTTGGAATA CTCTACTCTT ATCAGGCATC AGTAGATCCA
GAATTAACAG TATTTTTTGG AAAATTCTTG TTAAATATTG CAAACCCTCT AACGTTGGGA
TTTGTATTGC TAGTACTCGT TCATTTTATA GATGATTTGA TACATACTGA AAAAAGCATA
CTTAGGCTTA TAAAGAGGTT ATTCTTTAAC GTAGTTCTTG CATTTATACT AAGGCAGATG
TTGATTATAT CTTCGGATTA TTTGATCGGA TATACTGTTG AATTTATGGG TCTTGTAATG
TATATTTTAG CATATGTTTC GATATTGATA GTATTGTCCG TTGTATTATT TCACGAGCCA
AAATCTAAAG AAGAGATGAA TAACGAGTAG
|
|---|
| Protein sequence | MVSIKDIGKD YNVPEDKKYL VIVVDMDDDV GRKANIRTPI LSREDNINAA VRLGLTDPGD
SDVNSMLGGV QHYDHLKKEG KDVEIATISG DIDIESEVCA IKIKEQIDFL IYLYEPNFIY
LVSDGKEDEM VLKYLELKDI FVWKKRIVIK QNESLESTYY LMQEFIKKTM SQYIPLIFTS
IGFAMILYAI FSDLGWRIIA GLIGIYILSE GVGLVESIKK TLNESKKGLE VGKLSPFGNI
LGFLILLVGI LYSYQASVDP ELTVFFGKFL LNIANPLTLG FVLLVLVHFI DDLIHTEKSI
LRLIKRLFFN VVLAFILRQM LIISSDYLIG YTVEFMGLVM YILAYVSILI VLSVVLFHEP
KSKEEMNNE
|
|---|
| |