| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0353 |
|---|
| Symbol | |
|---|
| ID | 5329342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 366370 |
|---|
| End bp | 367557 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640792874 |
|---|
| Product | acetylornithine aminotransferase |
|---|
| Protein accession | YP_001329573 |
|---|
| Protein GI | 150402279 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR01885] ornithine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00220895 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTT TAGAAAAAGA ACAAATTATT TCAGATGAGA AAAAATACGT TATAAACACT
TACGGCCGAG TTCCAGTGGT CCTTGTAAAA GGAAAAGGAA TGAGCGTATT TGATACCGAA
GGAAAAGAAT ATCTCGATTT TCTTGCGGGA ATCGGAGTAA ATAACGTTGG GCACTGCCAC
CCTAAGGTTG TTGAAACAAT TAAAAACCAG GCAGAAACCT TAATTCACAT TTCAAATATT
TATTACAATG TTCCACAAAT CGAGTTGGCA AAAAAACTTG TAAATTTAAG CGGATTAGAT
AAAGCATTTT TCTGTAATAG TGGTGCAGAA GCAAACGAAG CTGCAATAAA ACTTGCAAGA
AAATATGGTA AAACAAAAGG TAAACAAGGG GAAATAATTA CAATGGAACA CTCATTCCAC
GGAAGAACCC TTACAACAGT TACTGCAACT CCTAAAGCAA AATATCAGGA AGGATTTGAA
CCATTACCAC AAGGTTTTGC ATACATTCCA TTTAATGATA TTGAAGCATT GAAAGCAGGA
ATTTCAGAAA AAACAGCTGC AATAATGATT GAACCAGTTC AAGGGGAAGG TGGAATTCAC
GTTGCAGATA AAGACTATTT AAAAGCCGTA CGAAAATTAT GCGATGAAAA TAATATCGTT
TTAATTTTTG ATGAAGTACA GTGTGGAATG GGTAGAACCG GAACTATTTT TGCATATGAA
CAGTATGGGG TACTCCCAGA CATTGTAACC CTTGCAAAAG GGCTTGGTGG GGGAGTTCCT
ATCGGCGCAA TAGTCGCAAA AAGTAAAATT GCAAGTGCAT TCACTCCTGG AAGTCACGGA
ACTACATTTG GTGGAAACCC ACTAGCATGT GCTTCATCTA ATGCAGCGAT CGATGTAATT
TCTGGACTTT TAGAAAATAC GCTTGAAATG GGAGACTACT TCAAAAATAA ATTAAAAATC
TTGGACAAAA AGTACGAATT TATAAAAGAA GTCAGATCTC TCGGACTTAT GATTGGAATC
GAATTAACAT TTAATGGATC AGATATCGTT TCGAAGATGT TTGAAAAAGG ATTTTTGATA
AACTGCACTT CAGATACCGT TTTGAGGTTC TTACCACCAT TAATTGTTGA AAAAGAACAT
ATCGATGCAA TTATTTCGGC TCTTGACGAA GTGTTTTCCG AAATTTAA
|
|---|
| Protein sequence | MSTLEKEQII SDEKKYVINT YGRVPVVLVK GKGMSVFDTE GKEYLDFLAG IGVNNVGHCH
PKVVETIKNQ AETLIHISNI YYNVPQIELA KKLVNLSGLD KAFFCNSGAE ANEAAIKLAR
KYGKTKGKQG EIITMEHSFH GRTLTTVTAT PKAKYQEGFE PLPQGFAYIP FNDIEALKAG
ISEKTAAIMI EPVQGEGGIH VADKDYLKAV RKLCDENNIV LIFDEVQCGM GRTGTIFAYE
QYGVLPDIVT LAKGLGGGVP IGAIVAKSKI ASAFTPGSHG TTFGGNPLAC ASSNAAIDVI
SGLLENTLEM GDYFKNKLKI LDKKYEFIKE VRSLGLMIGI ELTFNGSDIV SKMFEKGFLI
NCTSDTVLRF LPPLIVEKEH IDAIISALDE VFSEI
|
|---|
| |