| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0321 |
|---|
| Symbol | |
|---|
| ID | 5328982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 336611 |
|---|
| End bp | 337567 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640792843 |
|---|
| Product | CaCA family Na(+)/Ca(+) antiporter |
|---|
| Protein accession | YP_001329542 |
|---|
| Protein GI | 150402248 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.005086 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATCG AATCGGTCTT TTTTTTAGCA GTTGGTTTGT TCATGCTATC TTATGGTAGC
GATTGGTTTG TGTTAGGTGC TTCAAGAGTT GCAAAACAGT TTAACATCTC AAGTTTTGTA
ATCGGAGCTA CAATTGTTGC ATTTGGAACG TCCTTACCTG AAATTGTTAC AAGCGCATAT
GCAGCATCCA CAGGATCAGT TGATCTGGCA GTTGGAAATG CTCTTGGAAG TTGTATTGCA
AATATCGGGC TCGTACTTGG TTTAAGCTTG ATTATTTCTT CAGTATTTAT TAAAAACAGG
TCAGTTCTTA AAAACGGATA CCTGTATATA ATTTACACGA TAATTTTTAC AATACTTGGA
TACAACGGAT TCTCATTTTT CGATGGAGCA ATTTTGCTGA TTTTACTTGT ACTTTACGTG
ATATACACAA TAAAATCTGG TGAAATGGAC GAAGAAGAAC ATGAAAAAAG TGTGACGTTT
GGCAGGGCAA TATTTTACCT AGTACTCGGG CTTGCATTTG TAATTTTGGG GAGTAGTTTT
TTTGTCGATG GTGCAAAAGG TCTTGCAACT GCTTTTGGAA TCTCCGAAAA AATCATTGGA
TTTACAATCG TTGCATTTGG AACGTCCTTA CCTGAACTTG CAGTTTCTTT TGCCGCAGCA
AGACAGAAAC TTGGCGGAAT TGTCATTGGA AATGTAATTG GAAGTAACAT TGCAAACATG
TTTGGAGCAC TTGCAATAGC TGCAATGATT CACGAAATTC CAGCAGTTAA ATTTGAGCTT
TCAGTTAATA TTTTAATGGT CTTTTTGCTA CTGGTTTTGA TGAGTAAGGA AAAAATAAAA
TCAATGCTAA ATTTAAAATC TAAAACAGAG TATCTTTCAG AAATTACGAA AAAAGATGGT
TTAATTTTGA TAGGAATATA TGTAGTATTT GTTTTAGGAC TTACTGGATT CTTTTAA
|
|---|
| Protein sequence | MLIESVFFLA VGLFMLSYGS DWFVLGASRV AKQFNISSFV IGATIVAFGT SLPEIVTSAY
AASTGSVDLA VGNALGSCIA NIGLVLGLSL IISSVFIKNR SVLKNGYLYI IYTIIFTILG
YNGFSFFDGA ILLILLVLYV IYTIKSGEMD EEEHEKSVTF GRAIFYLVLG LAFVILGSSF
FVDGAKGLAT AFGISEKIIG FTIVAFGTSL PELAVSFAAA RQKLGGIVIG NVIGSNIANM
FGALAIAAMI HEIPAVKFEL SVNILMVFLL LVLMSKEKIK SMLNLKSKTE YLSEITKKDG
LILIGIYVVF VLGLTGFF
|
|---|
| |