Gene MmarC7_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0300 
Symbol 
ID5328606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp317145 
End bp317789 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content35% 
IMG OID640792821 
ProductV-type ATP synthase subunit D 
Protein accessionYP_001329521 
Protein GI150402227 
COG category[C] Energy production and conversion 
COG ID[COG1394] Archaeal/vacuolar-type H+-ATPase subunit D 
TIGRFAM ID[TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACG TAAACCCTAC AAGAATGGAA CTTCTAAAGT TGAAAGGAAA AATTAAACTT 
GCAGAAAAAG GACACAAACT CTTGAAACAA AAAAGAGACG CCCTTATGAT GGAGTTTTTT
GAAATCCTTG ATCAAGCTTC TGGAATAAGA GATAAAGTAA ATGATGCTCT TTCACAAGCA
TACAAAGACT TGATAATGGC TCAGGCAGTA ATGGGTACTT TATCAGTTAA AGAAGCTTCA
TTTGCAGCTA AAAATGATAA CATCGACTTA GATGTGGATA TGAGAAACAT CATGGGTATC
GATGTTCCAG TATTTGAAAT TTCAAACGTA AAAAGAGATA TTTCAAATAG AGGTTACAGC
CCTTACGGAG TTTCCTCAAA ATTGGATGAA GCTGCAAAGA ACTTCGAAGA AGCTTTAGAA
CTTATTACAG AACTTGCAGA AATCGAAACT TCGATAAAAT TACTCGCTCA GGAAATTATC
ACAACCAAAA GAAGAGTTAA CGCTCTTGAA TACGTTGTAA TTCCAAAAAT GAACGCAACC
AAAAAATACA TCGCTATGAG ACTTGAAGAG ATGGAGAGGG AGAACTTCTT CAGATTGAAA
ATCATTAAAG CGAGAATGGA TGCTAAAGAA GCTGAAGAAG CATAA
 
Protein sequence
MADVNPTRME LLKLKGKIKL AEKGHKLLKQ KRDALMMEFF EILDQASGIR DKVNDALSQA 
YKDLIMAQAV MGTLSVKEAS FAAKNDNIDL DVDMRNIMGI DVPVFEISNV KRDISNRGYS
PYGVSSKLDE AAKNFEEALE LITELAEIET SIKLLAQEII TTKRRVNALE YVVIPKMNAT
KKYIAMRLEE MERENFFRLK IIKARMDAKE AEEA