| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0286 |
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| Symbol | |
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| ID | 5327900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 300802 |
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| End bp | 302727 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640792807 |
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| Product | replication factor A |
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| Protein accession | YP_001329507 |
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| Protein GI | 150402213 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.439991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0476359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCG ACAAATTAAA ACAAAAAATA TTATCAAAAA TCAGTCAGGA AGAACTAGAA
AAAAAAGTAA AAGAAAAAAT TGAAGAGAAT TCTGGACTTC TTGGTGAGGA AAGTGCAGTA
ATGCTAGTTG CACAGGAACT CGGGATAGAA ATAACATATG GTGATGAAGA GGAATACGAT
TTTACAATAA GTGATATTGC TGACGGGCAA AAAAATGTTG AAGTCACCGG AAAAATTATT
GAAATTTCGC CTGCTAAAGA TTTTAATCGA AAAGATGGTT CAACTGGAAA ACTTGCATCA
ATTACCATTG GAGATAATAC TGGAATTACA CGACTTACGC TTTGGAACGA CAAAACTGAT
CTAATTGAAG GATTAAAAAA AGGCGACGTT GTAAAAATTG AAAATGCATT TAGTAGAAAG
TGGAACGACA AGGTTGAATT AAACAGCGGC TCAGAACTTT CAATTGACAA ACTTAAAAAA
TACGATGAAT CGAGATACCC CATTTTAAAA GAGAATTACA AAATTTCAGA ATTAATGCCT
AATTTATCTG GAACTATTAA TGCAGAAGTT GTTGCTGCAT ACCCTAAAAA AGAATTTAGC
AGAAAAGATG GAACAAAAGG CCAGCTAAAA TCATTGATTT TAAAAGACGA TACTGGAAGT
ATAAGGGGAA CACTCTGGAA TGAACTTGCA GATTTTGAAG TTAAAAAAGG AGATATTGCA
GAAGTAAGTG GATATGTAAA ACAGGGGTAT TCAGGACTTG AAATTTCTGT TGACAATATT
GGAATAGTTG AAGAATCTGC TAAGGAAGAA AAACCTGTTG AAAAAATGAA TATTTCTGAA
CTTGCTGATT TTGATGGAGA ATATGTAACA ATCTCTGGAA ATGTTGCGAA CATCTCCGGC
TCAAGAGAAG TTCAATTTAG CGATAGAACT GCAGAAGTTC AGGATATGTA CTTAAACGAT
GGAACTGGAA TGGTAAAAAT TGCATTCTGG GGCGCAAACA GAAATATTCT TAACGATTTA
AAAGAAGGAG ATTATTTAAA CGTTTCAAAC TGTAAATTAA GAACTTACAC AGACAATACT
GGCGAAAAAA GAGCAGATTT AACTTACAAC TACATGTCAG ACCTTAAAAA AGATGAAACT
GCAAGCGAAA AAATAGTTGA GAAAATAACT GCTATAGGGG ATATTTTAAG CGGAAGTTCT
GATAATGCTG ATGTAACGGT TATTGGAATG GTTACAAATG CTTATCCCGT AAATGAATTT
TCGAGAAGCA ATGGTGGAAC TGGAAAAGTT AGAAATATCG TGTTGGAAGA CAGTACTGGA
AGCATCAGGA TGGCTCTTTG GGACAGTGAT GCAGAAATCG AAATTTCTGA AGGCGACGTT
GTAAAATTAA TACATGGGTA TGCTAAAGAA AGTGGCGAAT ACATGGATTT ATCAACAGGA
AGATTTGGAA GAATCGAGGT AAATCCCGAA GGAATTTCAA TAAAATCTCC AAGAAATTAC
ATTGCAGAGC TTGAAGATGG TATTTCCACC GAAATTAGTG GAACTGTTGT AGACTACAGA
AAACAGGATG TAATTCTTAG TTTATGTCCA AACTGCAGAA AAAGATTGAA TTTAGTCGAT
AACAAATACA TGTGTGAAGT TTGTGGAGAA GTTGCGCCAA ACGAACTTTT AGTTTCAAAT
TTAACAATTG ACGATGGAAC TGGTGTTATT AACTGCAGAT TATATGGAAA TAACGTTGAA
AAAGTAACAG AACTTTCAAA AAATAAATTA AAAGAAATGA ATTTAGATGC ACTTTCAAAT
GTGCTTGGAA AAGATGTTTT ATTCTATGGA ACACCTTCAT TTAGAAACGA TGAATTAGAA
TTTGCAGTAA AAAGAGTTAA TTTTGTAGAT GCATCAAAAG AATTGGAAGT TTTAAAACAA
CACTAA
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| Protein sequence | MNIDKLKQKI LSKISQEELE KKVKEKIEEN SGLLGEESAV MLVAQELGIE ITYGDEEEYD
FTISDIADGQ KNVEVTGKII EISPAKDFNR KDGSTGKLAS ITIGDNTGIT RLTLWNDKTD
LIEGLKKGDV VKIENAFSRK WNDKVELNSG SELSIDKLKK YDESRYPILK ENYKISELMP
NLSGTINAEV VAAYPKKEFS RKDGTKGQLK SLILKDDTGS IRGTLWNELA DFEVKKGDIA
EVSGYVKQGY SGLEISVDNI GIVEESAKEE KPVEKMNISE LADFDGEYVT ISGNVANISG
SREVQFSDRT AEVQDMYLND GTGMVKIAFW GANRNILNDL KEGDYLNVSN CKLRTYTDNT
GEKRADLTYN YMSDLKKDET ASEKIVEKIT AIGDILSGSS DNADVTVIGM VTNAYPVNEF
SRSNGGTGKV RNIVLEDSTG SIRMALWDSD AEIEISEGDV VKLIHGYAKE SGEYMDLSTG
RFGRIEVNPE GISIKSPRNY IAELEDGIST EISGTVVDYR KQDVILSLCP NCRKRLNLVD
NKYMCEVCGE VAPNELLVSN LTIDDGTGVI NCRLYGNNVE KVTELSKNKL KEMNLDALSN
VLGKDVLFYG TPSFRNDELE FAVKRVNFVD ASKELEVLKQ H
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