Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0265 |
Symbol | |
ID | 5329271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 278972 |
End bp | 279574 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640792786 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001329486 |
Protein GI | 150402192 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00630944 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTACAA GAGAAAAAAT AGTGCAAAAT GCAGCAAAGT TGTTTCTTAA AAAAGGCTAT AATCAAACAT CTTTAAACGA AATAGCTGAA AAATCAGGTA TTACTAAGGG TGGTATTTAC CACCATTTTA AAGATAAAAA TGAACTTTTT GTAGAAATGG CCGAGTATTT TAAATCTAAA TTTATGTCAC TTTTGACAAA AATGGAGCAA GAACCTTCAT TAGAAAATTT GTTGAAGAAT TATTTTGAAA ATTCTGAAAT AGTAATGCAT GAAATTGCAG AATATCTCGA ATTAACTCTT AAAGACATTA GGTTCTTTCC AGAATTTCAA TCGAGATTTA TACTGGATTC AATTCAGTAC GGTCCAGAAG ATATGGACTT TACAATGCAT ACTAAAATGA TGTATTCAAT TCTGAAAAAT AAGATAGAAC TCGCCAAGAA AAATGGAGAG ATATTAGATG ATATCGATTC AAAAGAACTT TCGTTAGAAA TTGTTGCAAT TATCGAAGGT TATTCAAATT TAAGGCGGTT AAAATTAATT GACGAATCTT ACGAATATGG AAATAGGACT ATTGAACGAT TGTGGAGTCG AATAAAAAAA TAA
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Protein sequence | MSTREKIVQN AAKLFLKKGY NQTSLNEIAE KSGITKGGIY HHFKDKNELF VEMAEYFKSK FMSLLTKMEQ EPSLENLLKN YFENSEIVMH EIAEYLELTL KDIRFFPEFQ SRFILDSIQY GPEDMDFTMH TKMMYSILKN KIELAKKNGE ILDDIDSKEL SLEIVAIIEG YSNLRRLKLI DESYEYGNRT IERLWSRIKK
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