Gene MmarC7_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0254 
Symbol 
ID5328348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp263814 
End bp264563 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content33% 
IMG OID640792775 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001329475 
Protein GI150402181 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.345857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.41311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGA TATCGTGGAA TGTAAACGGG ATTCGTGCAT GTTTGAAAAA TGGTTTCATG 
GATTTTTTAG AGCGTGAAAG TCCAGATATA ATGTGCATAC AGGAGACAAA AGTGCAAAGT
GGACAGGTCC AGCTTGGACT TGATGGTTAT TTTCAATACT GGAATTATGC AGAAAAAAAG
GGTTATTCTG GAACCGCAAT TTTTACAAAA ATAAAACCAA ACAATGTTAT TTTGGGAATA
AAAAACACTG AACATGATGG TGAAGGCAGA GTACTTACCC TTGAATTTGA CAAATACTAT
TTAATAAATG TTTACACCCC AAATTCACAA CGGGGCCTTA CAAGGCTCGA ATATCGACAA
AAATGGGATC AAGATTTTTT AAACTATATA AAAACGCTTG AAAATGAAAA ACCCGTGATA
TTTTGTGGAG ATTTAAATGT CGCACACAAA GAAATCGATT TAAAAAATCC TAAAAACAAC
GTAAAAAATG CAGGATTCAC TCCAGAAGAA AGAATTGGGT TTGATAATAT TGTAGATTCT
GGATTTATAG ATACATTTAG GGAATTTAAC AAAGAACCGG ATAATTACTC GTGGTGGAGC
TACAGGTTCA ATGCAAGATC AAAAAATATA GGCTGGAGGA TTGATTATTT CTGCATTTCT
AAAATTTTAA GGGATAATTT GAAAGATGCA TTTATAATGT CGGAAGTTAT GGGTTCAGAC
CACTGCCCTG TTGGAATCAT ATTTGAATAA
 
Protein sequence
MKMISWNVNG IRACLKNGFM DFLERESPDI MCIQETKVQS GQVQLGLDGY FQYWNYAEKK 
GYSGTAIFTK IKPNNVILGI KNTEHDGEGR VLTLEFDKYY LINVYTPNSQ RGLTRLEYRQ
KWDQDFLNYI KTLENEKPVI FCGDLNVAHK EIDLKNPKNN VKNAGFTPEE RIGFDNIVDS
GFIDTFREFN KEPDNYSWWS YRFNARSKNI GWRIDYFCIS KILRDNLKDA FIMSEVMGSD
HCPVGIIFE