| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0202 |
|---|
| Symbol | |
|---|
| ID | 5328994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 213190 |
|---|
| End bp | 214053 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640792723 |
|---|
| Product | succinyl-CoA synthetase subunit alpha |
|---|
| Protein accession | YP_001329423 |
|---|
| Protein GI | 150402129 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.745722 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTTTAC TAGACGAAAA CACAAGAGCA ATTGTTCAAG GAATTACTGG AAATCAAGGA
AAGTTCCACA CAAAAAATAT GCTTGAATGC AATACAAATA TTGTAGCAGG CGTAACTCCT
GGAAAAGGTG GCCAGGATGT TTACGGAATT CCTGTTTATG ATACTGTTTT GGAAACTGTT
GAAAAATACG ATGCGAATGC ATCTTTGATA TTCATACCTG CACCATTTGT AAAAGATGCA
GCATATGAAG CAATAGATGC AGGAATTGAC CTCGTTACAA TCATTACTGA ACACATACCA
ATTCAGGATT CAATGGATAT TGTAGCATAC GGAAAAAAAC ACGGCGTAAA TATAATAGGA
CCAAATACTC CAGGATTAGC ATCCCCCAAA GTAGGAAAAC TTGGAATTAT CCCGATGAGT
ATATTAAAAG AAGGAAACAT TGGAATGGTA TCAAGAAGCG GTACCTTAAC TTACGAAATT
GCAAGCCAGC TCACTTCATC AAATTACGGT CAATCCTCAT GTGTCGGAAT TGGTGGAGAC
CCGATAACTG GTTTGAGATA CATTGAAGTT TTAGAAATGT TTGAAAAAGA CAGCGAAACT
GATGCAGTTG TAATGGTTGG AGAAATCGGT GGAAATGCTG AAGAAAATGC AGCTGAAAAA
ATGATTTCAA AAATGAAAAA ACCAGTAATT TCATATATTG CAGGACAGTC TGCACCCGAA
GGAAAAAGAA TGGGTCACGC TGGTGCAATT ATCGAAAAAG GGGTTGGAAC TGCAAAAAGT
AAAATGGAAG CACTTGAAAA TGCTGGTGCC CATGTTGCAA AGCGAATTTC AGATATTCCA
CTATTATTAA AAGAAATTAT TTAA
|
|---|
| Protein sequence | MILLDENTRA IVQGITGNQG KFHTKNMLEC NTNIVAGVTP GKGGQDVYGI PVYDTVLETV
EKYDANASLI FIPAPFVKDA AYEAIDAGID LVTIITEHIP IQDSMDIVAY GKKHGVNIIG
PNTPGLASPK VGKLGIIPMS ILKEGNIGMV SRSGTLTYEI ASQLTSSNYG QSSCVGIGGD
PITGLRYIEV LEMFEKDSET DAVVMVGEIG GNAEENAAEK MISKMKKPVI SYIAGQSAPE
GKRMGHAGAI IEKGVGTAKS KMEALENAGA HVAKRISDIP LLLKEII
|
|---|
| |