Gene MmarC7_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0196 
Symbol 
ID5328951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp206787 
End bp208121 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content30% 
IMG OID640792717 
ProducttRNA CCA-pyrophosphorylase 
Protein accessionYP_001329417 
Protein GI150402123 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) 
TIGRFAM ID[TIGR03671] CCA-adding enzyme 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.79483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAAT TAAATATTGG CGATTATAAT GATATTCTAA ACGAAGTTTT AAACGATATC 
AGTCCGACAG AAGTTGAAAA AAAGGAATTA AAAGTATTTT CGGATAAAAT AATCGCTAAA
ATCAAAGATA TTTCAAAAAA ACCTGTTGTT GATATTATTC AGGTCGGATC AACTGCAAGA
GATGCAAATC TAAAGGATGA TCACGATATT GACATATTTT TAAGATTTGA AAGAGAAACC
GATCGAGATA CTTTAAAAGA ATCGGGATTA AAAATCGGAA AAGAAGTAAT TGATTATTTC
AATGGAAAAT CATGGGTAGA ATATGCGGAA CACCCTTATG TTTCTGGAGA AATTGAAAAA
TTCAATCTCG ATATTGTTCC GTGCTACGGT ATTGAAAACT GCGAAAAAAT AATTTCTGCG
GTTGACAGAA CCCCACTTCA TAACGAATTT TTGATAATGT CTTATAAAAA TAAAAATTTA
TCAGATGATA TTCGACTTTT GAAAAAATTC TTAAAAGGTC TTGGAATTTA TGGTTCTGAC
TTAAAAACTG CAGGATTTTC AGGATACCTC TGTGAACTTT TAATATTAAA ATACGGCGGA
TTTTTAACCC TTATATCTGA CGTAAAAACC TGGAAACCAA CTAAATCAAT AGTATTAAAC
GAAATTTACG AAATGTATGA TTTGAAAAAA GATCATGTTT TTTCAAAATT TGATGATCCC
CTAGTAGTTT ACGATCCCGT TGATCTAAAT AGAAACGTTG CAGCAGCATT AAACGAAGAA
AACCTTTGCA AATTCATATT TTATTCAAAA ATGTTTTTGA AAAACCCTTC AAAAGACTTT
TTTTATGGAT TTGATAAAAA AATTACAGAT TTTTTAAACA GGCGGGAAAG GGGTTATTTA
CTAACTTTAG AAATTAAAAG GCCCGAAAAT ATCGTTGAAG ATGTAATTTA TCCACAAATG
GAAAAAATAC AAAAAAGTAT CAACAAATTA GTTAAAGAAC ATGATTTTGA ATATTTGAGA
TACCAAAATT TTGCAGATGA AAATACGTGT TATCTATCTT GGGAATTTTT AGTTAATGAA
CTCCCAAGTG TAAAATTAAG AATTGGGCCT CCAGTATACA GCGAACCGGG AGTAATGAAT
TTTATAACGC ATAACGAACA TTATTTTGTT AAAGGCTGCA ATGTTTGTGC GTACAAAACC
AGAAAATATA AAAACATACA AATACTATTC GAAGATATTG TTAATGGGAA ATTTAGGAAG
ATTATAACCT ATCCTAAGTA CGTATGCCCT GAAAATGCGG AAATACGATT AGGTACTTTT
GTCGAGAGGA CATGA
 
Protein sequence
MKKLNIGDYN DILNEVLNDI SPTEVEKKEL KVFSDKIIAK IKDISKKPVV DIIQVGSTAR 
DANLKDDHDI DIFLRFERET DRDTLKESGL KIGKEVIDYF NGKSWVEYAE HPYVSGEIEK
FNLDIVPCYG IENCEKIISA VDRTPLHNEF LIMSYKNKNL SDDIRLLKKF LKGLGIYGSD
LKTAGFSGYL CELLILKYGG FLTLISDVKT WKPTKSIVLN EIYEMYDLKK DHVFSKFDDP
LVVYDPVDLN RNVAAALNEE NLCKFIFYSK MFLKNPSKDF FYGFDKKITD FLNRRERGYL
LTLEIKRPEN IVEDVIYPQM EKIQKSINKL VKEHDFEYLR YQNFADENTC YLSWEFLVNE
LPSVKLRIGP PVYSEPGVMN FITHNEHYFV KGCNVCAYKT RKYKNIQILF EDIVNGKFRK
IITYPKYVCP ENAEIRLGTF VERT