Gene MmarC7_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0176 
Symbol 
ID5329164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp188462 
End bp189865 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content34% 
IMG OID640792697 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001329397 
Protein GI150402103 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC AAAAACCATA TATCCCAATA CTTGTTACAG CGATTTTATC GTCTGCAATT 
ATTTTCGTTA GTGCATACGT CTTGATGATG ACATCAATGT TTGATTTAAA AATATTATTT
GTATTGTTTA TTGTTTCGGC AGTGATTTCA ACAGTGGTTG GATATACAAT TCTTAAAAAA
ACATGTCTCG ACAAAGTGGA TAAGTTTTTA GCATCTTCTT CAAAAATAAT TGGAAAAGAT
TATGATCATT GCGATGAAGA AATGTTTAAT ACAGTAATAT CAGACTTTGA AAAGATAAAA
AAAGACGAAG ATTTTTTAAA AATTTACAAA AAAGAAGTTA CAAATACCTT TGGAGAACTC
CACACAATAT TTAAAAGTTT AGAAAACGGA GATTTCACAA TAAGAGCTGA TACTAACCGA
AAACATAATG CATTGCAGGT AACAACCAAC AATGCAATTG TAAACGTTGC TACAATGGTA
AACGACCTTA AAAAACAGGT CGCATACTTA AATTCTGAAC TTTTAAAAGC AAAAGAAGAC
CTTGTAAGAG CTGAGGAAAC TTCAGAACAG GTCGCAGATG CAGCAAGCCA GGTTGCAACC
GCAGCAGCAG ACCAGTCTGC AAAATTGCAG GACGTATCTG ACCAGCTCGA AGCAACATCT
GAAATTACAA CTGCAGTAAC CAGTGCAGCT GAAGATACTG TTGTTGCAGC ATCTGAAATT
GAAGAAAACT CTGAAATCGG AGTTAAAAAA GTTGAAAATG CAATTGAAAC AATGCAAGGT
ATCACAAATG TTATTGAAAA CCTTGGAAAA GCAATTCAAG AACTCGGTGA CGAATCCAAA
AAAATTAACG AAGTTACAGT TTTAATTAAA GATGTTGCAG AACAGACTGG ATTACTTGCT
TTAAATGCAT CAATTGAAGC AGCACGTGCT GGAGATGCGG GAAAAGGGTT CGCAGTTGTT
GCAAGTGAAA TCAAGTCACT CGCAGAAGAA ATTAAAAAAT CCGTTGAAGA TATCAACAGA
ACAATTAACG GCGTAAACAA AAAAGTTGAA GCTACAATAG ACCTTGGAAT TTCCGGAAGA
GATGAAGTTG ATAAGGGAGT TATTGCAATT GATGAAGTTA ACGGTGCTTT CTTAAAAATC
AGAGAAAGTG TAGAAACTAC CTCTGAAAAA ATAAATTCGA TAAAAATTAA TGCTGAAAAA
TCAGCAAGCA ATGTAGAAAG TGCTCTTAGA AATGCACAAG ATATTGCATC AATTTCTGAA
GAATTTGCGG CAACTGCAGA AGAATTAACT GCGTCAGCTG AAGAACAGAG TAGAATCATG
AATGAAATCG ATGATGCAAT AGAAGAGATA ACCTCAGCAT CTGAAAAAAT TTCTAACGAT
GTAAGTAAAT TTAAAACACA ATAA
 
Protein sequence
MKTQKPYIPI LVTAILSSAI IFVSAYVLMM TSMFDLKILF VLFIVSAVIS TVVGYTILKK 
TCLDKVDKFL ASSSKIIGKD YDHCDEEMFN TVISDFEKIK KDEDFLKIYK KEVTNTFGEL
HTIFKSLENG DFTIRADTNR KHNALQVTTN NAIVNVATMV NDLKKQVAYL NSELLKAKED
LVRAEETSEQ VADAASQVAT AAADQSAKLQ DVSDQLEATS EITTAVTSAA EDTVVAASEI
EENSEIGVKK VENAIETMQG ITNVIENLGK AIQELGDESK KINEVTVLIK DVAEQTGLLA
LNASIEAARA GDAGKGFAVV ASEIKSLAEE IKKSVEDINR TINGVNKKVE ATIDLGISGR
DEVDKGVIAI DEVNGAFLKI RESVETTSEK INSIKINAEK SASNVESALR NAQDIASISE
EFAATAEELT ASAEEQSRIM NEIDDAIEEI TSASEKISND VSKFKTQ