Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0156 |
Symbol | |
ID | 5329579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 172452 |
End bp | 172934 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640792677 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001329377 |
Protein GI | 150402083 |
COG category | [S] Function unknown |
COG ID | [COG1238] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.461417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0291058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATATTT ACCAATTTGC AGAATATATT GTACTTAACT ACGGATATTT TGGAATATTT TTAATTGCAT TTACTGAAGC GGTAATTCAA CCCGTAATTC CAGACATATT TATTATCGGC GCTGCAGCTT TCGGATTAGA TTCTGTAACA TGCGCCTTTG TAGCTTCTTT TGGGTCACTT ACCGGGGGAT ACACAGGTTA TTTTCTTGGA AAAAAACTTG GAACAAATGC ATTTCTAAAA ATTTTCAAAG AAAAAAATTT TATCAAAGGA AAAGCGTTTT TCGAAAAATT TGGAGTTTGG GGCGTTGCGA TTGCAGGTTT TACCCCAATT CCATACAAGG TGTTTGCATG GCTTGCAGGC ATATTTAAAA TGAATCTTCT GTCATTTGGT GCAGGAACAC TTCTTGGAAG AATTCCAAGG TTTTTGCTTG TCGCATACTT TGGTTACAGT TTAGGAATGT TATTTGGCTT GCATACACCT TAA
|
Protein sequence | MDIYQFAEYI VLNYGYFGIF LIAFTEAVIQ PVIPDIFIIG AAAFGLDSVT CAFVASFGSL TGGYTGYFLG KKLGTNAFLK IFKEKNFIKG KAFFEKFGVW GVAIAGFTPI PYKVFAWLAG IFKMNLLSFG AGTLLGRIPR FLLVAYFGYS LGMLFGLHTP
|
| |