| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0133 |
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| Symbol | |
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| ID | 5329193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 151805 |
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| End bp | 152986 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640792654 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001329354 |
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| Protein GI | 150402060 |
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| COG category | [N] Cell motility
[R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.310931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0473724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATAT TATCCATTTT CGAAACAAAG GAACCAAAAA AATTGCTTGA AAAGGGTATT
GACTATTATA ATAAAGGTAA ATATCAAAAA GCGATAGAAT TTTTTAATAA AGCCATTGGT
TCAGAACCAA AAAATCCTGA TGCATGGTAT TTTAAAGGAA ATGCCTACAA GATGCTTGAA
AAATCAAAAC TAGCTCAGGA TTCATACGAA AAAGCACTAT CCATAAGCCC AACCAATCTC
GAAATAATAA AAAACTATGC GATGTTGTTA AATTCCTTGG AATTGTTTAA AGAATCTATT
GAAATTTTGG AAAATGTTTC TGAACCAGAT TTTAAAGTTA CTGAAATTTT AGGTGACGCT
TACTTAAAAA CAGGTAAGTT TGAAGAAGCA CTTGTGGAAT TTGATAAAAT TCTAGAAAAA
AAACCAAAAT ATAAAGACGT ACTTGCAAAA AAAGGAACTG CACTCGTTGG ACTTAGAAAA
TTTAACGAAG CTCTTGATAT TTATGAAAAA ATCTTAAAAA TAAGCCCGTA TGATACACAA
GTATGGAAAA ACATTGGTAA TGCATTCTAT ACAGTTAAAA GATATGAAAA AGCAATTCAA
TTTTACGACA TGTATTTATC GGAACACAAA AATAACTTTC AAGTGACCCT TTCAAAAGGC
GATGCTTTGA GAAAACTCGG AAAAACTAAC GAAGCACTTG ATCTCTATAC AAAAGTTCTT
GAAAACCATA TAAACAGCCA TGAACCTTGG TGCAGAGTTG GACTTTTGTA TTACGAAAAT
AAAGATTATG AAACTGCCCT TTATTACTTA GAACTTGCAT ATGAAAGAAA TCCTCTAAAT
CCATCTATAC TTGTAAAAAT TGCTCGAACA TACATTAAAT TAAAAAATTA CAATAAAGCT
CTCGAATTTA TTGAAAAAGC ATTGGATAAA GATAACGGAT ATGCAAAAGC ATGGTGCTAT
AAAGGCCAGA TTTTAAACAT TTTAGAAAGA CATTATGAGG CAGTAGACTG CTTTAAAAAA
GCTATTACAC TGAATAAAAA CGTTTCTGAC TTTTGGATAC AGCTTTCCAA TGTATATAAA
ACCATTGGAA ATGAAGAATA TTCAAAAGAA GCATATGCTA ATGCAGTAAA ACTTGAACCC
CAACTTACAA GTCCAAAAAG TACTGAAAGT TCAAGATTAT AA
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| Protein sequence | MGILSIFETK EPKKLLEKGI DYYNKGKYQK AIEFFNKAIG SEPKNPDAWY FKGNAYKMLE
KSKLAQDSYE KALSISPTNL EIIKNYAMLL NSLELFKESI EILENVSEPD FKVTEILGDA
YLKTGKFEEA LVEFDKILEK KPKYKDVLAK KGTALVGLRK FNEALDIYEK ILKISPYDTQ
VWKNIGNAFY TVKRYEKAIQ FYDMYLSEHK NNFQVTLSKG DALRKLGKTN EALDLYTKVL
ENHINSHEPW CRVGLLYYEN KDYETALYYL ELAYERNPLN PSILVKIART YIKLKNYNKA
LEFIEKALDK DNGYAKAWCY KGQILNILER HYEAVDCFKK AITLNKNVSD FWIQLSNVYK
TIGNEEYSKE AYANAVKLEP QLTSPKSTES SRL
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