| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0113 |
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| Symbol | |
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| ID | 5328088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 130381 |
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| End bp | 131550 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640792634 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001329334 |
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| Protein GI | 150402040 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0571239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.263923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGACC CCATAATCCA GATAACAGAA TTATACAAAA TATTCGGTAA AAAACCAGAA
AAAGCATACC CATTAATTAA AGAAGGTTTT TCCAGAAAAG AAATAAAAGA AAAAACAAAA
CAGGTTGTTG GACTTAAAAA CATCAATTTT GACGTTAAAC GTGGAGAAAT TTTTGTAATC
ATGGGACTTT CCGGAAGCGG TAAATCCACA CTGATAAGGT GCATCAACAG GCTCATAAAG
CCTACCTACG GAAAAATAGT TCTTGAAAAT GGCGTTGATA TATCCAAAAT GCGTGAAAAA
GACCTCCTTG AAATTAGAAG GAAGTATTTT GGAATGGTAT TTCAAAAATT TGGACTTTTG
CCAAACCGTT CAGTTTTAGA AAACGTGGCA CTCGGACTTG AAATTCAGGG AATTGGACTT
GAAGAAAGAA TTGAAAAGTC AGAAAAGGCT CTTTCTCTCG TTGGGCTTAA AGGCTGGGAA
AAAAGTAAAA TTTCGGAATT AAGTGGCGGA ATGCAGCAGC GTGTCGGTCT TGCAAGAGGT
CTTGCAGTAA ATCCGGAAAT ATTATTGATG GATGAACCAT TCAGCGCACT TGACCCGTTA
ATCAGACTTG AAATGCAGGA ACTTCTTTTA AAAATTCAGA AAAAGATGAA AAAAACGATT
ATTTTCATAA CTCATGATTT GAACGAAGCG ATAAAGCTCG GCGACAGGAT CATGATTTTA
AATGAAGAGG GAAGCCTCGT TCAGTTGTCA CAACCTGAAG AAATCCTTTT AAATCCTCAG
AATGACTTTG TTGAATCCTT TGTAAAAGAA GTCGATAAAA CAACAGTAAT TCGGGCTGAA
TCACTTGTTA AAAAACCAGA ATTTACACTA AATACGCGAA TGGAAAAAGA AAATGCAATT
AAAATTTTAG GCGATTTGAG CCTTGATTTT GCATACGTAC TCGATGATTC TGGAAAATAC
GTTGGAGTCG TAAATAAAGA AGAACTTCAA AATTCAGAAC AGATTATCGA TTGTATTCAA
AAAATTAAAC CTTTAGAAGA TGTAAAAACC ATTAATCAAG GGTTGCCTCA GTTTATTTCT
TCAGATTATC CCGTTCCAGT TGTTGACGAT GAAAATAACT TTTTAGGATA CGTTGAATTT
GAAGAAGTAA TTAACCTGAT AAAAAATTAA
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| Protein sequence | MNDPIIQITE LYKIFGKKPE KAYPLIKEGF SRKEIKEKTK QVVGLKNINF DVKRGEIFVI
MGLSGSGKST LIRCINRLIK PTYGKIVLEN GVDISKMREK DLLEIRRKYF GMVFQKFGLL
PNRSVLENVA LGLEIQGIGL EERIEKSEKA LSLVGLKGWE KSKISELSGG MQQRVGLARG
LAVNPEILLM DEPFSALDPL IRLEMQELLL KIQKKMKKTI IFITHDLNEA IKLGDRIMIL
NEEGSLVQLS QPEEILLNPQ NDFVESFVKE VDKTTVIRAE SLVKKPEFTL NTRMEKENAI
KILGDLSLDF AYVLDDSGKY VGVVNKEELQ NSEQIIDCIQ KIKPLEDVKT INQGLPQFIS
SDYPVPVVDD ENNFLGYVEF EEVINLIKN
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