Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0076 |
Symbol | |
ID | 5328076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 94811 |
End bp | 95902 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640792597 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001329297 |
Protein GI | 150402003 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.541731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.38624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTACC CAGACAAAAT GACACCCGTT GAAAGAGCTA CTGCTAAAGC GAAAGGGGAA CCAATCGATA GAATTGCATG TAACCCAAAT ATCGGAAACG GAATGGCAAG AATTGCAGGC TACAAAATTT CACAATTTAA CACGGATCCA GAAGCATTAG CGGACGCAAT TATTAAAACA TACAGAAGAT TTGGATCAGA CGGTGCAAGA GTTTTCACAG ATTTGTTTTT GATTTCAGAA GCGATGGGTG CGAAAATTAA CATGCCTTAT GACAATACTG CAGATTTGGA AGAACCTGCA ATAAATGACA TGTCAGAATT TGATAAATTA AAAGTTGTTA ACCCATACAC GGATGGTAGA ATTCCTGTTC ATTTAAGGGC CCTTGAAATT GTACGGGATG AAATAGCAAG TGAAGTTGGA GTTACTGCTT CAGTTGTTGG CCCATTTACA AACGCTTTCT TTTTAATCGG CGTAGAAAAA ATGACAAAAA TGCTTTTAAA AGACCCTGAA TCAGTTCACA AACTATGCGA AATTTCACTC CAAAGCTGCA TTGCATTAAC CGATGCAGTT CTCGAAAAAG GGACGGGAGT TACAGTTTCA GAACCACTTT CTTCATGTAC TGTTGTAAGT CCAAAACACT TCAGAGAATT TTCAGCACCT TATTTGAAAA GATTAATCGA CCATATCAAA GCAAGAACTG GAAAATTAGT TATTCACATC TGTGGAAAGA CCGATCCTAT CTGGGAAGAT CTTGTGGATA TGGGTGTTGA TGTTTTAAGT ATTGATGATA TTGCAGATCT GGAAAACTGT GCAGAAACTG TTGGTGACAG GATGGTTATT GCAGGAAATG TCGATCCTTC AGGAGTATTG TATGCCGGTT CAAGAGAAGA TGTTAGAAAA GCTACCTTAA AGTGTATTAA ACAGGGAATT AAGGCTAAAA AAGGATATAT GATAATGTCT GGATGTAGTC TTCCGGTAGA GGTTCCTGTT GAAAATATCG ATGCAATGAT GGATGCTGCA AGGGAAGCCG GATGGCCAAT TACAGGAGAA AAATTAGATT ATTTACTTAG TATTGATAAA TACAAAGATT AA
|
Protein sequence | MDYPDKMTPV ERATAKAKGE PIDRIACNPN IGNGMARIAG YKISQFNTDP EALADAIIKT YRRFGSDGAR VFTDLFLISE AMGAKINMPY DNTADLEEPA INDMSEFDKL KVVNPYTDGR IPVHLRALEI VRDEIASEVG VTASVVGPFT NAFFLIGVEK MTKMLLKDPE SVHKLCEISL QSCIALTDAV LEKGTGVTVS EPLSSCTVVS PKHFREFSAP YLKRLIDHIK ARTGKLVIHI CGKTDPIWED LVDMGVDVLS IDDIADLENC AETVGDRMVI AGNVDPSGVL YAGSREDVRK ATLKCIKQGI KAKKGYMIMS GCSLPVEVPV ENIDAMMDAA REAGWPITGE KLDYLLSIDK YKD
|
| |