Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0060 |
Symbol | |
ID | 5327967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 66859 |
End bp | 67881 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640792581 |
Product | phage integrase family protein |
Protein accession | YP_001329281 |
Protein GI | 150401987 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.106477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTCA AGTTTCCAAA AACTCACTAC GGTGATATAA TGGACGATAT AACTGACATG ATATTGCTCA AAAAAGATTC CAAAGAGCAC ACTGCACCAA ACGACACTAA AAAACTCGAA ATCGATAAGT TAGTTGATGA ATTCAGCGAA CAGAGACGAT TTGACAATAT AAAAGAAGCT ACAATATCCA ACGATAACGA CCGAATCAGA GTATTCTTGC GATACATATA TTACACACTG AATAAAACAC CCGAAACTCT AACTAACCGA GATTACATGG CTTTTTTCAC ATACGTCAAA CGAGAGCGAA ACTGCAGCGA TAACACAGTG AACAAATACT TCAAGCTGCT CAAAGTGTTT TATCGGCTGA TGAAATTCAA AAACTTCAGC GACTTTGTAG TTGAAAGTAA AGAACGAAAA AGGTTTTCAC GGTTTGATAT CAAGCATTAC GATGCAATAG ATGAAGATAC ATTAAACCAA GTATTAGTTA AGCTGCTGAA ATCGAACAGT GGTACAAAAA TTCGTGATGC AACATTTATC CGACTCCTGT GGGATACTGG CTGTCGAGTG TCTGAAGCGT GCAATCTGAC ATATTCAGCG TCAGACTTAA ACAAGGGTGT GTTCAAACTA ACACACACGA AAACCAAACA AGATCGGACA GTTGTGTGTT CCAAAGAGAC ACTGAAACTC CTAAACTATT TTCTACAGCA CGACCCGGAT AATTCACCTG AAGATCACCT GTTCAAGTCA GCTAATGGTG CCAAGTTGAA CAAATACACT CTTTCAGCTC GGTTCCGAAA TATTGTGAAG GAATTGAAAA AGGATGGAAC AGTCCCCAAA AACCAGTGGC TGGTTATTCA CTCATTACGC CACGGCCGTG CGGTTGATTT GCTCAATAAA GGTGTTTCAA TCGACGTTGT AAAAGAGTAT TTGGGTCATG CCTCAATCGA AACCACCCTC ATTTACTCAC ATTCAACCGA GCGAAAAAAC AAAATGCTTG ACCAGATTTC AAAGATTTTG TAA
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Protein sequence | MTVKFPKTHY GDIMDDITDM ILLKKDSKEH TAPNDTKKLE IDKLVDEFSE QRRFDNIKEA TISNDNDRIR VFLRYIYYTL NKTPETLTNR DYMAFFTYVK RERNCSDNTV NKYFKLLKVF YRLMKFKNFS DFVVESKERK RFSRFDIKHY DAIDEDTLNQ VLVKLLKSNS GTKIRDATFI RLLWDTGCRV SEACNLTYSA SDLNKGVFKL THTKTKQDRT VVCSKETLKL LNYFLQHDPD NSPEDHLFKS ANGAKLNKYT LSARFRNIVK ELKKDGTVPK NQWLVIHSLR HGRAVDLLNK GVSIDVVKEY LGHASIETTL IYSHSTERKN KMLDQISKIL
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