Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0042 |
Symbol | |
ID | 5327797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 47255 |
End bp | 48205 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 640792563 |
Product | hypothetical protein |
Protein accession | YP_001329264 |
Protein GI | 150401970 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000066001 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGGACACAT TAAAAAAACA GTTGTTAACT AAAAAAACGC TTTTATCATT TTTGATATCG TTTTTGATAA TTTATTGGAT ATTTTCAAAG CTTGATTTTT ATTTAATGAT GAGTTCTATT AAAAATACCA ATTTTTTCTG GTTTTTTGTG GCATTTGGAT GTTTTTATGC ATCTATTTTT TTAAAAAGTA TTCGTTGGAA ACTTTTATTA AACGATGCAG AACTTGAAGT TAAATTAAAA GATTCTATAT TGATATTCTA TCTCTCGATG TTTGCAAATT CAATAATTCC TGCAAAGATA GGCGATATTT ACAGAAGTTA TCTTTTAAAA CAAAAAAACA ATGCTCCAAT ATCCTTGAGT TTTGCAACAG TATTTGTTGA ACGTATTTTT GATTTAATGA CGATGATTCC ACTTCTTTTG ATTTTTGGTA TTATTTCATT TAATTCCGAT ATACCTGTGG AAGTATTCAT AGCTTTGAAG TATGGAATAG CGTTAATTAT ATTATTAATT GTATTTACAT TGATTTTTTT AAAATTAAAT GCTAAAATCA TGGATAAAAT AAATAATAAA CTAATTAAAA ATGTTTTTAC TAATTTTGAA AAAGGAATTA GAACTTTAAA AGTAAGATCA ATTCCAAAAT TGTTTTTACT TTCTTTAATC TCCTGGATAA CTGAAGGCTT TACGATATAT TTCATATTTT TATCGATAGG ATTGAACTTT GATGTTTTAT TTTCGATATT TACTGATTTA TCAAGTTCCC TCTTAACGGC GATTCCATTT ACGCCTTCAG GCCTTGGAGT TGTAGAATAT GCTTTAGTAT TTATTTTAAA TCTTAAAAAT ACGGGAATAA CAGAAAGTTC TGTTGTTATC GTGCTATATC GAGTAATATC TTATTTTAGT ATCATATTTT TAGGAAGTAT TACTCATTTT ATGTATGGAA TAAAAAAATA G
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Protein sequence | MDTLKKQLLT KKTLLSFLIS FLIIYWIFSK LDFYLMMSSI KNTNFFWFFV AFGCFYASIF LKSIRWKLLL NDAELEVKLK DSILIFYLSM FANSIIPAKI GDIYRSYLLK QKNNAPISLS FATVFVERIF DLMTMIPLLL IFGIISFNSD IPVEVFIALK YGIALIILLI VFTLIFLKLN AKIMDKINNK LIKNVFTNFE KGIRTLKVRS IPKLFLLSLI SWITEGFTIY FIFLSIGLNF DVLFSIFTDL SSSLLTAIPF TPSGLGVVEY ALVFILNLKN TGITESSVVI VLYRVISYFS IIFLGSITHF MYGIKK
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