| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0028 |
|---|
| Symbol | |
|---|
| ID | 5328099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 36385 |
|---|
| End bp | 36912 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640792549 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001329250 |
|---|
| Protein GI | 150401956 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0978645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000275224 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGGCAGAG GGAAAGTTTT AAAACCACAT AAACGGCTCC ATACCGATCT AGAAACCGGA
AATGGTGAAA CCCTCGAAGA CTACGAACGC TTTGAAGAAA TTTCAAAACG CTGGAACATG
GACAAAAACA AAACTTTCCG GAAGATGATA AATTTAATCT TTGAAAATAT CGGTGTTTAC
GAAAAATTAA GAGATTATGC AGAAGAACTC GGAAAAAAAG ACGCTGAAAT TTTAGAATTG
AAAAAAGAAA TCGCTTTAAA AAATCAGGAC CTTTCAAAAC GGGATCTTGA AATTGAAAAA
TTAAACGCGA TTCTTCCAGA AAGTTCCGAA GACCAGACCT ATTCGTGGCT TCAGAAGTGG
TTAAAAGACT GGAGAACAAC TCCAGACGAA ACGAGAGAAC TTGCTAGACC AATGATAATT
AAAAAGGGCG TTGTAGTCAG AAATGAAATA AACACGCTTT TAGGGCTTGT TGATTACGAG
CCAACAGTAG AAAGCGAATT TGAAAAAGTT AAATCGGGAG CAACGTGA
|
|---|
| Protein sequence | MGRGKVLKPH KRLHTDLETG NGETLEDYER FEEISKRWNM DKNKTFRKMI NLIFENIGVY
EKLRDYAEEL GKKDAEILEL KKEIALKNQD LSKRDLEIEK LNAILPESSE DQTYSWLQKW
LKDWRTTPDE TRELARPMII KKGVVVRNEI NTLLGLVDYE PTVESEFEKV KSGAT
|
|---|
| |