| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0012 |
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| Symbol | |
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| ID | 5327823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 18477 |
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| End bp | 20765 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640792535 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001329236 |
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| Protein GI | 150401942 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0793231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00171802 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGGCGGG CTCTTGAATT ACTAAACAAA ATGCGGAAAA ATAAGTCATT TAATGACTAT
ATTGAACATG TTAGGGAAAT TCCTGAAAAA GATGCGGAGT ACTCCGAAGA AGAATTAAAT
CTTCCACAAT GTATTCAAAA TTATTTGAAC GGTAAATATA TCAAACCATA TACGCACCAG
TATGAAACAC TAAATCATGC AAGGGGTGGA AAAAACGTAC TTATTACAAC TTCAACCGCT
TCTGGAAAGA GTTTATGTTT TAATTTGCCC GTATTCGAGA AGTTAGCAAA CGATAGTTCC
GCAACTGCAC TTTACATTTA TCCAACAAAA GCACTGTCAA ATGATCAATT AACGACTTTA
AAATCCATGG ACTCTGAAAT GAGTTTGAAA ATTTATCCCG ATAGATATGA TGGAGATACA
AATCGGGATT TAAAATCGGA AATTAGGGCC ACTAGTCGGT TGGTAGTTAC AAACCCATAT
ATGCTTCATT TAGTACTCCC ATATCATAAA GGATGGACTC GCTTTTTTGA AAATCTTAAA
TATGTAATCA TTGACGAAGC GCATATGTAC CGGGGGGTTT TTGGATCCCA TGTTTCTTTT
TTAATTAGGC GTTTAAGACG AATTTGTGAA AATTATGGAT CAAACCCCCA ATTTGTAATG
TCTACTGCCA CCCTTGCAAA TCCAGAAGAG TTCTCTCAAA AATTAACAGG TCTTGATTTT
GAAGTTGTTG AAAACGATGG ATCTCAAAAA AGTAAAAAAT ATTTTGTACT TTATAATACG
ATGAAACAGA CAACTTCAGA AGATTCATGG AATAAAGCAG CAGTTCGATT ATTTAAAGCG
AGTATGTTGT CAAAACTTCA AACAATTGGA TTTACACGAA CTAGAAGAAT GACTGAACTT
CTGACCGTTT GGGTAAAAGA AGACCTTGAC CCAACACTTC AAAATAAAGT TTCGGCTTAT
CGGTCAGGAT ACAGTACAAA AAACAGAATT GAAATAGAAA ATCGTCTTAA ACAGGGCAAA
TTATGGGGTA TTTTTTCAAC AAATGCCTTG GAAGTTGGAA TTGATATTGG ATCTCTTGAT
TCAGTACTAA TGTATGGCTA TCCTGGAACT TTAATGTCAC TTTGGCAGCA GGCAGGCCGT
GCTGGACGTT CAGGAAGTGA TTCGATCGTT ACACTTTTTG CAAATTCTGA TGCACTTGAC
CAATATTTGG TAAAACATCC TGAAATGATA TTTGAAAAAA CTCCTGAAAA TGCGGTAGTC
GACTTGAATA ATTACCATAT TCTTGAAAAA CAGCTGGAAT GTGCGGCCTA TGAACTGGAG
CTAACTCCAA ATGGTAAAGA TTCAGATTTT TGTAACGGCA TCGAAAAACG TATTTTGAGA
ATGGAAGAGA ATGGACGTTT AAAAAAACAG AATGGAGGAT ATGTGTCAAC CACTGAAAAT
CCTGCTTTAA ATGTAAATAT GAACGTTGTT TCATCTGAAA TTTTCAAAGT TATTGATGAA
AATGGAAGAA AAATTGAAGA AATCGATAAA TGGCACGTAT ATTGTGAAGC CCATAAAGGT
GCAATTTTAA TAAATCAGGG TGAAAAGTAC CTGATTAAAG ATATTGATCT TGAAAATAAA
AAATGTATCG CTAAAAAGGT GAAATACGAT TACCATACCG ATGCATATGC CACAACCGAT
ATAAAAATTG AAAAAGAACT TAATTCAAGA AATTACGGGG AATTTACCTT TCATTTTGGG
GAAGTTAATG TAATTACCAA TTACTTCGAA TTTGCAGAAA AAAAGTATGG AACTGTCCTA
ACTAGAAAAC CTTTAGATTT ACCTCCTTTA ACCTTCAAAA CCACCGCAAT GTGGATTACA
TTTCCACCAA GATTCATGAA ATCAGTAACT GAAGGAGATA AAAGTGACAT TGGTGGACTT
CACGGTGCAG AACATGCAAT GATAAATATA TTCCCTCTTC ACGTGATGTG TGATAGAAGC
GATATTGGTG GAGTTTCAGA TCTAAAACAC CAAGATACCA AACGTCCAAC GATTTTCATA
TATGATGGAA TGGAAGGTGG AATTGGATTA TCTGAAAAAG CATTTACGCT TCCAAAGAAG
ATCGTTAAAA CTGCTTATGA ACTTGTTCGG GATTGTAATT GCGAAACAGG ATGTCCTGCA
TGCATTTATT CTCCAAAATG TGGAAATTCA AATCAAGAAC TTGATAAAGT TTCAACTTTA
AGGATCCTTG AAGGATTGAA TAAAAAACTT GAATTTGAAC TAGATTGGTG GCTTGATAAT
AAGGAATAG
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| Protein sequence | MGRALELLNK MRKNKSFNDY IEHVREIPEK DAEYSEEELN LPQCIQNYLN GKYIKPYTHQ
YETLNHARGG KNVLITTSTA SGKSLCFNLP VFEKLANDSS ATALYIYPTK ALSNDQLTTL
KSMDSEMSLK IYPDRYDGDT NRDLKSEIRA TSRLVVTNPY MLHLVLPYHK GWTRFFENLK
YVIIDEAHMY RGVFGSHVSF LIRRLRRICE NYGSNPQFVM STATLANPEE FSQKLTGLDF
EVVENDGSQK SKKYFVLYNT MKQTTSEDSW NKAAVRLFKA SMLSKLQTIG FTRTRRMTEL
LTVWVKEDLD PTLQNKVSAY RSGYSTKNRI EIENRLKQGK LWGIFSTNAL EVGIDIGSLD
SVLMYGYPGT LMSLWQQAGR AGRSGSDSIV TLFANSDALD QYLVKHPEMI FEKTPENAVV
DLNNYHILEK QLECAAYELE LTPNGKDSDF CNGIEKRILR MEENGRLKKQ NGGYVSTTEN
PALNVNMNVV SSEIFKVIDE NGRKIEEIDK WHVYCEAHKG AILINQGEKY LIKDIDLENK
KCIAKKVKYD YHTDAYATTD IKIEKELNSR NYGEFTFHFG EVNVITNYFE FAEKKYGTVL
TRKPLDLPPL TFKTTAMWIT FPPRFMKSVT EGDKSDIGGL HGAEHAMINI FPLHVMCDRS
DIGGVSDLKH QDTKRPTIFI YDGMEGGIGL SEKAFTLPKK IVKTAYELVR DCNCETGCPA
CIYSPKCGNS NQELDKVSTL RILEGLNKKL EFELDWWLDN KE
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