Gene Smed_R0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_R0050 
Symbol 
ID5323738 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2993590 
End bp2995067 
Gene Length1478 bp 
Protein Length 
Translation table 
GC content55% 
IMG OID640791813 
Product16S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.487076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGAGTTTGAT CCTGGCTCAG AACGAACGCT GGCGGCAGGC TTAACACATG CAAGTCGAGC 
GCCCCGCAAG GGGAGCGGCA GACGGGTGAG TAACGCGTGG GAATCTACCC TTTTCTACGG
AATAACGCAG GGAAACTTGT GCTAATACCG TATAAGCCCT TCGGGGGAAA GATTTATCGG
GAAAGGATGA GCCCGCGTTG GATTAGCTAG TTGGTGGGGT AAAGGCCTAC CAAGGCGACG
ATCCATAGCT GGTCTGAGAG GATGATCAGC CACATTGGGA CTGAGACACG GCCCAAACTC
CTACGGGAGG CAGCAGTGGG GAATATTGGA CAATGGGCGC AAGCCTGATC CAGCCATGCC
GCGTGAGTGA TGAAGGCCCT AGGGTTGTAA AGCTCTTTCA CCGGTGAAGA TAATGACGGT
AACCGGAGAA GAAGCCCCGG CTAACTTCGT GCCAGCAGCC GCGGTAATAC GAAGGGGGCT
AGCGTTGTTC GGAATTACTG GGCGTAAAGC GCACGTAGGC GGATTGTTAA GTGAGGGGTG
AAATCCCAGG GCTCAACCCT GGAACTGCCT TTCATACTGG CAATCTAGAG TCCAGAAGAG
GTGAGTGGAA TTCCGAGTGT AGAGGTGAAA TTCGTAGATA TTCGGAGGAA CACCAGTGGC
GAAGGCGGCT CACTGGTCTG GTACTGACGC TGAGGTGCGA AAGCGTGGGG AGCAAACAGG
ATTAGATACC CTGGTAGTCC ACGCCGTAAA CGATGAATGT TAGCCGTCGG GCAGTTTACT
GTTCGGTGGC GCAGCTAACG CATTAAACAT TCCGCCTGGG GAGTACGGTC GCAAGATTAA
AACTCAAAGG AATTGACGGG GGCCCGCACA AGCGGTGGAG CATGTGGTTT AATTCGAAGC
AACGCGCAGA ACCTTACCAG CCCTTGACAT CCCGATCGCG GATAGGAGAG ATCCTATCCT
TCAGTTCGGC TGGATCGGAG ACAGGTGCTG CATGGCTGTC GTCAGCTCGT GTCGTGAGAT
GTTGGGTTAA GTCCCGCAAC GAGCGCAACC CTCGCCCTTA GTTGCCAGCA TTCAGTTGGG
CACTCTAAGG GGACTGCCGG TGATAAGCCG AGAGGAAGGT GGGGATGACG TCAAGTCCTC
ATGGCCCTTA CGGGCTGGGC TACACACGTG CTACAATGGT GGTGACAGTG GGCAGCGAGA
CCGCGAGGTC GAGCTAATCT CCAAAAGCCA TCTCAGTTCG GATTGCACTC TGCAACTCGA
GTGCATGAAG TTGGAATCGC TAGTAATCGC AGATCAGCAT GCTGCGGTGA ATACGTTCCC
GGGCCTTGTA CACACCGCCC GTCACACCAT GGGAGTTGGT TCTACCCGAA GGTAGTGCGC
TAACCGCAAG GAGGCAGCTA ACCACGGTAG GGTCAGCGAC TGGGGTGAAG TCGTAACAAG
GTAGCCGTAG GGGAACCTGC GGCTGGATCA CCTCCTTT
 
Protein sequence