Gene Smed_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3574 
Symbol 
ID5324462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3781073 
End bp3781846 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID640792523 
Productenoyl-CoA hydratase 
Protein accessionYP_001329224 
Protein GI150398757 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000415637 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGTTACG AGACGTTGCT GGTGGAAACG CGGGGCCGCG TGGGCCTGAT TACGCTCAAC 
CGACCCCAGG CGCTCAATGC GCTGAATGCG GCGGTTATGC GCGACCTCCA TGAAGCGCTG
AACGCCTTCG ACGCCGACAA GGGCGTCGGC GCCATCGTTC TTACCGGCTC CGAAAAGGCA
TTTGCCGCCG GGGCCGACGT CAAGGAGATG CAGGCGCTCG ATTTCGTCGA GGGTTATCTC
GGCGACTTCC TCGGCGGCTG GGAGCGTGTC GCGGACGCCC GCAAGCCTAT GATTGCGGCG
GTCTCGGGCT ATGCGCTCGG CGGCGGCTGC GAACTCGCCA TGATGTGCGA CCTCATCATC
GCTTCCGAAA CGGCGAAGTT CGGACAGCCG GAGATCACGC TTGGCGTTAT TCCCGGCATG
GGTGGGTCGC AGCGGCTGAC CCGCGCCATC GGCAAGGCGA AGGCGATGGA CCTCATCCTC
ACCGGCCGCA TGATGGACGC GGCGGAGGCC GAGCGCTCCG GGCTGGTGTC GCGCGTGGTG
GCTCCCGACA GGCTCCTGGA GGAGGCGCTC GGCGCCGCCG AAAAGATCGC ATCCTTCTCG
CTGCCGGCGG CGATGATGGC CAAGGAGGCG GTCAGCCGCT CTCTGGAGCT GACGCTGGCC
GAGGGGCTGC GTTTCGAGCG GCGGCTCTTC CAGTCGCTCT TCGCGACGGA GGATCAGAAA
GAGGGCATGG GCGCCTTCGT CGCCAAGCGC AAAGCCGAAT TCAAAAACAA GTGA
 
Protein sequence
MGYETLLVET RGRVGLITLN RPQALNALNA AVMRDLHEAL NAFDADKGVG AIVLTGSEKA 
FAAGADVKEM QALDFVEGYL GDFLGGWERV ADARKPMIAA VSGYALGGGC ELAMMCDLII
ASETAKFGQP EITLGVIPGM GGSQRLTRAI GKAKAMDLIL TGRMMDAAEA ERSGLVSRVV
APDRLLEEAL GAAEKIASFS LPAAMMAKEA VSRSLELTLA EGLRFERRLF QSLFATEDQK
EGMGAFVAKR KAEFKNK