Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3574 |
Symbol | |
ID | 5324462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3781073 |
End bp | 3781846 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640792523 |
Product | enoyl-CoA hydratase |
Protein accession | YP_001329224 |
Protein GI | 150398757 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000415637 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGTTACG AGACGTTGCT GGTGGAAACG CGGGGCCGCG TGGGCCTGAT TACGCTCAAC CGACCCCAGG CGCTCAATGC GCTGAATGCG GCGGTTATGC GCGACCTCCA TGAAGCGCTG AACGCCTTCG ACGCCGACAA GGGCGTCGGC GCCATCGTTC TTACCGGCTC CGAAAAGGCA TTTGCCGCCG GGGCCGACGT CAAGGAGATG CAGGCGCTCG ATTTCGTCGA GGGTTATCTC GGCGACTTCC TCGGCGGCTG GGAGCGTGTC GCGGACGCCC GCAAGCCTAT GATTGCGGCG GTCTCGGGCT ATGCGCTCGG CGGCGGCTGC GAACTCGCCA TGATGTGCGA CCTCATCATC GCTTCCGAAA CGGCGAAGTT CGGACAGCCG GAGATCACGC TTGGCGTTAT TCCCGGCATG GGTGGGTCGC AGCGGCTGAC CCGCGCCATC GGCAAGGCGA AGGCGATGGA CCTCATCCTC ACCGGCCGCA TGATGGACGC GGCGGAGGCC GAGCGCTCCG GGCTGGTGTC GCGCGTGGTG GCTCCCGACA GGCTCCTGGA GGAGGCGCTC GGCGCCGCCG AAAAGATCGC ATCCTTCTCG CTGCCGGCGG CGATGATGGC CAAGGAGGCG GTCAGCCGCT CTCTGGAGCT GACGCTGGCC GAGGGGCTGC GTTTCGAGCG GCGGCTCTTC CAGTCGCTCT TCGCGACGGA GGATCAGAAA GAGGGCATGG GCGCCTTCGT CGCCAAGCGC AAAGCCGAAT TCAAAAACAA GTGA
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Protein sequence | MGYETLLVET RGRVGLITLN RPQALNALNA AVMRDLHEAL NAFDADKGVG AIVLTGSEKA FAAGADVKEM QALDFVEGYL GDFLGGWERV ADARKPMIAA VSGYALGGGC ELAMMCDLII ASETAKFGQP EITLGVIPGM GGSQRLTRAI GKAKAMDLIL TGRMMDAAEA ERSGLVSRVV APDRLLEEAL GAAEKIASFS LPAAMMAKEA VSRSLELTLA EGLRFERRLF QSLFATEDQK EGMGAFVAKR KAEFKNK
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