| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3573 |
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| Symbol | |
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| ID | 5324461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3780080 |
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| End bp | 3781000 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792522 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001329223 |
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| Protein GI | 150398756 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000376379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCGGAAT TGCCCGAGGT GGAAACGGTC AAGCGCGGAC TGGCGCCGAC GATGGAGGGA
GCACTTCTCG TGCGCGCCGA ATTGCGCCGT CCCGATCTGC GCTTTCCCTT TCCCGAGAAT
TTCGAGGACG CAGTCGCCGG CCGGCGTATC GTCGCGCTCT CGCGCCGCGC CAAATATCTG
ACGATCGAGC TGGAGGGCGG CGACGTCATC ATCGCCCATC TCGGCATGTC CGGCTCGTTC
AGGATCGAGT TTGACGGTCC CGGGGAGGGC CGCATCAAGG AGAGCGCCGA TCCCGCCGTC
CCCGGCGATT TCCACCGTCC GCGCAGCAAG GACGAGAAAC ACGACCATGT CGTCTTCCAT
CTCGATGCCT CCTGCGGCCC GGCCCGGGTC ATCTATAACG ATCCACGCCG CTTCGGCTTC
ATGGCTCTGG CGCGGCGCGA AGCGCTTGCC GAGCACGTCT TTCTTCGCGG CCTCGGCGAG
GAGCCGACCG GCAACGCTCT CGATGCGGCC TATCTCGCCG CCCGGTTCTC CGGCAAAGCG
CAGCCGCTGA AAGCCGCTCT TCTCGATCAA AGGACGATCG CCGGCCTCGG CAATATATAC
GTTTGCGAGG CATTGTGGCG TTCGGGCCTT TCGCCGAAAA GGGCGGCAGG TACGCTCGTC
GACAAGCGGG CTCGCCCGAA GCAGGCGCTG GTTCAGCTGA CGGATGCGAT CCGCGCCGTC
ATCGCAGATG CGATCGCCGC CGGCGGTTCC TCGCTCAAGG ATCACATTCA GGCGGATGGC
AGTCTTGGCT ATTTCCAGCA CAGCTTCTCC GTCTATGACA GAGAAGGCGA GGCTTGCCGC
ACGTCCGGCT GCCGCGGTAC GGTTGAGCGC ATCGTTCAGG CAGGGCGTTC GACCTTTTAC
TGTCCGCACT GCCAGAAATA G
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| Protein sequence | MPELPEVETV KRGLAPTMEG ALLVRAELRR PDLRFPFPEN FEDAVAGRRI VALSRRAKYL
TIELEGGDVI IAHLGMSGSF RIEFDGPGEG RIKESADPAV PGDFHRPRSK DEKHDHVVFH
LDASCGPARV IYNDPRRFGF MALARREALA EHVFLRGLGE EPTGNALDAA YLAARFSGKA
QPLKAALLDQ RTIAGLGNIY VCEALWRSGL SPKRAAGTLV DKRARPKQAL VQLTDAIRAV
IADAIAAGGS SLKDHIQADG SLGYFQHSFS VYDREGEACR TSGCRGTVER IVQAGRSTFY
CPHCQK
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