| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3572 |
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| Symbol | ubiE |
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| ID | 5324460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3779120 |
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| End bp | 3779896 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792521 |
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| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
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| Protein accession | YP_001329222 |
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| Protein GI | 150398755 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000345623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCGGACG AGCGCGTATC GGCGAGTGGC GGAATGGAGA CCTCTTTCGG TTTTCGCGAA
GTCGGCACGG GCGAGAAGCA GCCGCTCGTC AACGATGTCT TCCACAAGGT CGCCAAACGC
TACGACATCA TGAACGACGT GATGTCGGCC GGGCTGCACC GCGTCTGGAA GGATGCGATG
ATCGCGGCGC TCAACCCGCC GGGCCGCGAG GACTACCGGG TCCTCGACGT CGCCGGCGGC
ACCGGCGACA TCGCCTTCCG TATTGTCGAG CGCTCCGGGC GCAAGGCTCA AGCGACCGTG
CTCGACATCA ACGGCTCGAT GCTTTCGGTC GGTGCCGAGC GGGCGCGCAA GAAGGGCATC
GAAGCCAATC TCGAATTCGT CGAGGCCAAT GCCGAAGACC TGCCTTTCGC GGCGAATTCC
TTCGACGCCT ATACGATCGC CTTCGGTATT CGCAACGTGC CGCGCATCGA AGTGGCTCTG
CGCGAGGCCT ATCGGGTGCT GAAGCGCGGC GGGCGGCTGC TCGTACTCGA GTTCTCCGAG
GTCGAGATGC CGCTGCTCGA CCGCTTCTAC GATGCATGGT CCTTCAATGC GATCCCGAAA
TTCGGCAAGC TCATCACCGG TGACGATGCA CCTTACCAAT ATCTGGTCGA ATCGATCCGC
AAGTTTCCAA ACCAACGCGA TTTCGCCGCC ATGATCCGCG ATGCCGGCTT CGCGCGCGTC
TCCTTCACCA ACTATACCGG CGGCATAGCA GCGCTGCATT CCGGCTGGAA AATCTGA
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| Protein sequence | MADERVSASG GMETSFGFRE VGTGEKQPLV NDVFHKVAKR YDIMNDVMSA GLHRVWKDAM
IAALNPPGRE DYRVLDVAGG TGDIAFRIVE RSGRKAQATV LDINGSMLSV GAERARKKGI
EANLEFVEAN AEDLPFAANS FDAYTIAFGI RNVPRIEVAL REAYRVLKRG GRLLVLEFSE
VEMPLLDRFY DAWSFNAIPK FGKLITGDDA PYQYLVESIR KFPNQRDFAA MIRDAGFARV
SFTNYTGGIA ALHSGWKI
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