Gene Smed_3571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3571 
Symbol 
ID5324459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3777541 
End bp3779115 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content65% 
IMG OID640792520 
Product2-polyprenylphenol 6-hydroxylase 
Protein accessionYP_001329221 
Protein GI150398754 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID[TIGR01982] 2-polyprenylphenol 6-hydroxylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000179776 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACGC CAGGCGCATA TTTCCGTCTC ATACGGATCG GCTGGGTCCT TGCGCGCGAG 
AACGCGTTTG CGGCGGTCCC CTCCGAACAC CTGCCCCCGC TCGCACGTTT CGTGCAGAAG
CTCGCCGGCC TATTGGCCCG CCGCGAGGCG CGCCTCGAGG AGCGCAACGA CCGGCTTGCC
CGCGCGGTGG AACGGCTCGG CCCCTCCTAT GTCAAGATCG GCCAGTTCCT GGCCACACGA
CCGGATGTGG TCGGCGCCGA GCTTGCCGCC GACCTGTCGC TGCTGCAGGA CCGCATGGCG
ACCTTTCCGC AGAGCGAATC AAGGGCTGCG ATCGAAGCGT CGCTCGGCCG GCCGGTCGAT
GCACTGTTCC TCGAATTTTC CGAGCCCGTT GCAGCCGCAT CGATCGCCCA GGTTCACGCC
GCCGTGATCA TGCGCGACGG CAAACGCGAA CGGGTTGCGG TCAAGGTCGT TCGCCCCGGC
GTGCGCCAGC GTTTCGCCGC CGACATCGAA GCCATGTACC TGGTTTCGCG CATGCAGGAG
CGGTTCCTGC CCTATACGCG TCGCCTCAGG CCCGTCGAGG TGACGAGGAC GCTCGAGCAG
ACGACCAAGG TCGAAATGGA CCTGAGGCTC GAGGCCGCCG CGCTTTCCGA ACTCGGCGAG
AACACCAAGG AGGATTCCGG TTTTCGCGTG CCCAGGGTCG ACTGGGAGCG CACCGGCCGG
GACGTCGTGA CGATGGAATG GATCGACGGC GTCAAGATGT CGGATATCGA AGGCCTGAAA
AGGGCCGGTC ACGACCTGAA CCGCCTTGCA GAAACGCTCA TCCAGTCCTT TCTGCGCCAC
ACGCTCAGGG ACGGGTTCTT CCACGCGGAC ATGCACCAGG GCAACCTGTT CGTCGACGAT
GCGGGCCATA TCGTCGCCGT CGACATGGGG ATTGTCGGCC GCCTCGGCCG CAAGGAACGC
CGCTTCCTCG CAGAAATCCT CTACGGCTTC ATCATGCGCG ATTATCAGCG TGTCGCGGAC
GTCCATTTCG AGGCCGGTTA CGTTCCCTCG CATCACGACG CCGCAAGCTT CGCCCAGGCG
ATCCGCGCCA TTGGAGAGCC GATCCACGGC CAGCCGGCCG AAACTATCTC CATGGCGAAG
CTTCTGACGC TGCTTTTCGA GGTCACCGAG CTTTTCGACA TGCAGACGCG TCCCGAACTG
GTGATGCTGC AGAAGACCAT GGTCGTCGTC GAGGGTGTCG CCCGAACGCT CAACCCGCGC
TTCAACATGT GGAAGGCCTC CGAGCCGGTC GTCGGCAGGT GGATACGGGA CAATCTCGGA
CCGAAGCGCA TCGTCGCGGA TCTGCGCGAT GGCATGCATG CGGCGCTCCG GGTCGCCGAG
GCGCTTCCGG AAATCGCGGC CAGGACGGAA CGCTTCTCCG CAGACGTCAT GGCGATGAGC
GAAAAGGGCT TGCGCTTCGA TGCGGATACC TCGGAAGCGA TCGGCAGAGC CGAAGCGCGG
CACACGCGCT CCGGCCGCAT TGCATTGTGG GTGATCGCGG CCACGCTCAC CTACATCGCC
TGGCAGCTTG CGTGA
 
Protein sequence
MSTPGAYFRL IRIGWVLARE NAFAAVPSEH LPPLARFVQK LAGLLARREA RLEERNDRLA 
RAVERLGPSY VKIGQFLATR PDVVGAELAA DLSLLQDRMA TFPQSESRAA IEASLGRPVD
ALFLEFSEPV AAASIAQVHA AVIMRDGKRE RVAVKVVRPG VRQRFAADIE AMYLVSRMQE
RFLPYTRRLR PVEVTRTLEQ TTKVEMDLRL EAAALSELGE NTKEDSGFRV PRVDWERTGR
DVVTMEWIDG VKMSDIEGLK RAGHDLNRLA ETLIQSFLRH TLRDGFFHAD MHQGNLFVDD
AGHIVAVDMG IVGRLGRKER RFLAEILYGF IMRDYQRVAD VHFEAGYVPS HHDAASFAQA
IRAIGEPIHG QPAETISMAK LLTLLFEVTE LFDMQTRPEL VMLQKTMVVV EGVARTLNPR
FNMWKASEPV VGRWIRDNLG PKRIVADLRD GMHAALRVAE ALPEIAARTE RFSADVMAMS
EKGLRFDADT SEAIGRAEAR HTRSGRIALW VIAATLTYIA WQLA