Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3568 |
Symbol | |
ID | 5324456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3775013 |
End bp | 3775918 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640792517 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001329218 |
Protein GI | 150398751 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00847142 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGGTTG ATGCGGCGCC AGTTGATGTA ACGATTGTGG GAGGAAGCTA TGCGGGTCTT TCCGCGGCAT TGCAGCTGGC AAGGGCGAGG CGCTCCGTGG TGGTCGTCGA TTCGGGCGCG CGCAGGAACC GCTTCGCCGA CACGTCGCAT GGGTTCCTCA GCCGCGACGG CGAAGCGCCG GCGGTGATCG CGGCGCACGG GCGGGAGCAG TTGATGGCCT ATCCCAATGT GCGATTCGTC GAAGGAATGG CTGACACGGT AAGCCGCGGC GGCGCGAATC TCATCGTCTC GATACAGGGT GAAAAGATCG CCGCGCGGCG GTTGATCCTG GCCACCGGGG TGATCGATGA ATTGCCGTCG CTGCCGGGAC TTCAGGAACG ATGGGGCCGT GCCGTCTTTC ATTGCCCCTA TTGCCACGGC TACGAGCTCG GGCAGGGGCG AATCGGCGTT CTCGCGACCG GTGAGAACAG TTTTCACCAG GCTATGATGC TGCCGGACTG GGGACCGACC ACCTTGTTTG CCAATGATGT ATTCGAGCCC GATGCCGCCC AGGCCGCCAT GCTCGAGGCA CGCGGCGTGG AGATCGAAAG GCAGAAGGTC GTCGCTCTCG ACGGGCCGAA GGCGACCTTG GTGCTGGAAG GCGGTCGGAC TGTTTCCCTC GAAGGTCTTT TCGTTGCGTC CCGTACCCGC ATGGCAAGCG GCCTGCCCGC AGCGCTCGGA TGCGCTTTCG AGGAAGGCCC GCTCGGGCCT TTTATACGGA CGAATGAGGC AAAGGAGACG AGCGTGGAGG GCGTCTACGC CTGCGGCGAT GCGGCGCGCT CGGCGGGCTC GGTCTCCCAT GCGGTGGGCG ACGGCGTCAC GGCAGCCGTG GCTGCCCATA AATCGTTGAT TTTCGACGTG CATTGA
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Protein sequence | MSVDAAPVDV TIVGGSYAGL SAALQLARAR RSVVVVDSGA RRNRFADTSH GFLSRDGEAP AVIAAHGREQ LMAYPNVRFV EGMADTVSRG GANLIVSIQG EKIAARRLIL ATGVIDELPS LPGLQERWGR AVFHCPYCHG YELGQGRIGV LATGENSFHQ AMMLPDWGPT TLFANDVFEP DAAQAAMLEA RGVEIERQKV VALDGPKATL VLEGGRTVSL EGLFVASRTR MASGLPAALG CAFEEGPLGP FIRTNEAKET SVEGVYACGD AARSAGSVSH AVGDGVTAAV AAHKSLIFDV H
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