| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3565 |
|---|
| Symbol | |
|---|
| ID | 5324453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3772354 |
|---|
| End bp | 3773178 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640792514 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001329215 |
|---|
| Protein GI | 150398748 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0121] Predicted glutamine amidotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0143883 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCGTT GGGCAGCCTA TCGCGGAGAG CCGCTCTATC TCGAAGAACT CGTGACGTCG
CCCAAGCATT CCCTGATCGA ACAGTCCCAT TGCGCCGTCC GGGCTAAGAC GGCGACCAAT
GGCGATGGCT TTGGGATTGC CTGGTACGGC GACCGGCCTG AGCCGGGTCG CTATCGCGAT
ATCTTGCCGG CCTGGTCGGA TTGCAATCTG AAGAGCATCG CGAGGCAGAT TCGATCCCCG
CTGTTCCTCG CCCATGTTCG CGCGGCGACC GGCGGCGGTA CACGCCGCGA CAATTGCCAT
CCCTTCGTCT TCGGCCGCTG GTCCTTCATG CACAATGGTC AGGTCGGAGA TTTCGAGTAT
TTGCGGCGGC CGATGGAGAC CATGCTCGGC AACGAGCTCT ATCAGGCGCG CACCGGCACG
ACGGATTCGG AACTGCTTTT CCTGCTCGCC TTGCAGTTCG GCCTCGAGCG CGATCCCCTC
GGGGCCGTCG CCGAGGCGCT CGCCTTCGTC GAGCGGCTTG CCGAACGCCT GGAGCGACCG
GCACTCGTGC GCTTCACGGC GGCTTTTTCC GACGGCCGCG ACCTTTACGC GGTTCGATAT
GCCACCGACT GGAAGGCGCC TACACTCTAT GCCGGGCCGA TGGGGCCCGC CGGTGGATAT
TGCCTCGTCT CCGAGCCGCT CAACGATGAT GACGATGCCT GGCTGGAGAT TCCGGACGGC
AGCGCGATCG TGGTCGGCGA AAACGGAGTC GACGTTCGTC TCTTCAGGAC CGGCGACGTT
CCGCCGCGGC CGGTCCTGGT CATTCCGGAA GAGGTTGAGG CGTAA
|
|---|
| Protein sequence | MCRWAAYRGE PLYLEELVTS PKHSLIEQSH CAVRAKTATN GDGFGIAWYG DRPEPGRYRD
ILPAWSDCNL KSIARQIRSP LFLAHVRAAT GGGTRRDNCH PFVFGRWSFM HNGQVGDFEY
LRRPMETMLG NELYQARTGT TDSELLFLLA LQFGLERDPL GAVAEALAFV ERLAERLERP
ALVRFTAAFS DGRDLYAVRY ATDWKAPTLY AGPMGPAGGY CLVSEPLNDD DDAWLEIPDG
SAIVVGENGV DVRLFRTGDV PPRPVLVIPE EVEA
|
|---|
| |