| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3562 |
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| Symbol | |
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| ID | 5324450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3767908 |
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| End bp | 3769875 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792511 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_001329212 |
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| Protein GI | 150398745 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0524] Sugar kinases, ribokinase family
[COG3892] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.249096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCAGA TTTCATCGGC TGAAGTTCCA TCGGCTGACA TTCCTGCAAC AGAGGGAACC
AGGCCTCTCG ACATCATCAC GATCGGCAGA GCCTCGGTCG ATCTTTACGG GCAGCAGATC
GGCACGCGGC TGGAAGACGT GGCGAGCTTT GCCAAGTCGG TCGGCGGCTG CCCCTGCAAC
ATCTCGGTCG GTACCGCGCG ACTTGGCCTG AGATCCGCCT TGCTGACCCG CGTCGGCAAC
GAGCAGATGG GCCGCTTCAT TCGCGAGCAG CTTCAGCGTG AAGGGGTCGA GACGCGCGGC
ATCGTCACCG ATCCGGAGCG GTTGACCGCG CTTGCGATTC TTTCCGTCGA AAACGAAAAA
TCCTTCCCGC TGCTCTTTTA CCGCGACAAT TGCGCCGATA ACGCGCTCAG CGAGGATGAT
GTGGCGGAAG ACTTCATTCG CTCCGCGCAT GCGATCCTCG TTACCGGCAC GCATTTCTCG
AAGCCCAATA CGGACGCAGC CCAGCGCAAG GCGATCAGGA TTGCCAAGGA AAACGGTTCC
AGGATCGTCT TCGACATCGA CTACCGCCCT AATCTCTGGG GCCTTGCGGG CCACGATGCG
GGCGAGAGCC GTTATATAGC CTCCGACCGC GTCTCCGCAC ATCTGCGAAC CGTCCTTGGC
GATTGCGACC TGATCGTCGG CACCGAGGAA GAAGTGCTGA TCGCATCAGG CGAAAACGAT
CTGCTCGCGG CGCTCAAGTC CATCCGCTCG CTTTCCAAGG CCACGATCGT GCTCAAACGC
GGACCGATGG GCTGCATCGT CTATGACGGA CCGATCTCGG ACGACCTCGA AGACGGTATC
GTCGGCAAGG GCTTCCCAAT CGAGGTTTAC AACGTCCTTG GCGCCGGCGA TGCTTTCATG
TCCGGTTTCC TGCGCGGCTG GCTGAGGGGC GAGCCGCATG CGACCTGCGC GACCTGGGCG
AATGCCTGCG GCGCCTTCGC GGTTTCCCGC CTGCTCTGCG CGCCTGAAAT CCCGACCTGG
ACCGAGCTGC AGTACTTCCT CGAGCACGGC AGCAAGGTGA AGGCGCTTCG CAAGGACGAG
GCGATCAACC ACGTGCATTG GGCAACGACG CGCAGGCGCG AGATACCGCT GCTGATGGCG
CTTGCCGTCG ATCACCGCAG CCAGCTCGAA GACATTGCCG AGGGAAATCC GGAACTGCTC
TCGCGCATAC CGGCCTTCAA GGTCCTCGCC GTCAAGGCGG CGGCGGAGGT GGCCGCCGGC
CGCTCCGGCT TCGGGATGCT CATCGACGAC AAATACGGAC GCGATGCGCT TTATGCTGCC
GGCGCCTATC GCGATTTCTG GATCGGAAAG CCCGTCGAGC TGCCGGGCTC GCGGCCGTTG
CAGTTCGAAT TCAGCCAGGA TCTCGGCAGC CGCCTTATCG AGTGGCCGGT CGACCATTGC
ATCAAAGTGC TTTCCTTCTA CCACCCTGAC GATCCGGCCG AACTCAAGAC CGCCCAGATT
GCCAAGCTTC GTTCGGCCTT CGAGGCGGCG CGCAAGGTCG GACGCGAGAT CCTGATCGAG
ATCATCGCCG GCAAGCATGG ACCACTCGAC GACCGGACTG TACCGAGAGC GCTCGAGGAA
CTCTATGATG CAGGCTTGAA GCCGGACTGG TGGAAGCTCG AGCCCCAGGC AAGCCGCGCA
GCCTGGAGAG CCATCGATGC CGTGATCGAG CGGCGCGACC CGCTTTGCCG GGGCGTGGTG
CTCCTCGGCC TGGAAGCACC CTATGAAGTG CTGAAGAATG GGTTCGCGGC GGCCAGAACA
TCGAAGACGG TCAGGGGATT TGCCGTCGGA AGGACGATCT TCGCCGATGC CGCCAGAGCC
TGGCTCTCCG GCGGGATGAC CGACGAACAG GCGATCACCG ACATGGCGGC AAAGTTCAAG
GCACTCGTGG ATCTTTGGCT GCAACTGGGC GAGACCAGGG ATCTATAG
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| Protein sequence | MSQISSAEVP SADIPATEGT RPLDIITIGR ASVDLYGQQI GTRLEDVASF AKSVGGCPCN
ISVGTARLGL RSALLTRVGN EQMGRFIREQ LQREGVETRG IVTDPERLTA LAILSVENEK
SFPLLFYRDN CADNALSEDD VAEDFIRSAH AILVTGTHFS KPNTDAAQRK AIRIAKENGS
RIVFDIDYRP NLWGLAGHDA GESRYIASDR VSAHLRTVLG DCDLIVGTEE EVLIASGEND
LLAALKSIRS LSKATIVLKR GPMGCIVYDG PISDDLEDGI VGKGFPIEVY NVLGAGDAFM
SGFLRGWLRG EPHATCATWA NACGAFAVSR LLCAPEIPTW TELQYFLEHG SKVKALRKDE
AINHVHWATT RRREIPLLMA LAVDHRSQLE DIAEGNPELL SRIPAFKVLA VKAAAEVAAG
RSGFGMLIDD KYGRDALYAA GAYRDFWIGK PVELPGSRPL QFEFSQDLGS RLIEWPVDHC
IKVLSFYHPD DPAELKTAQI AKLRSAFEAA RKVGREILIE IIAGKHGPLD DRTVPRALEE
LYDAGLKPDW WKLEPQASRA AWRAIDAVIE RRDPLCRGVV LLGLEAPYEV LKNGFAAART
SKTVRGFAVG RTIFADAARA WLSGGMTDEQ AITDMAAKFK ALVDLWLQLG ETRDL
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