| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3561 |
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| Symbol | |
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| ID | 5324449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3765994 |
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| End bp | 3767862 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640792510 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_001329211 |
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| Protein GI | 150398744 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3962] Acetolactate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.238424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA AAACCGTGCG CCAGGGTACA GTGCGCTTGA CCATGTCGCA GGCCGTGGCG
CGGTTCCTGA CCCGGCAGAT GACGATCATC GAGGGCGAGC GCGTGCCGAT TTTTGGCGGC
GTCTTCGCGA TTTTCGGTCA CGGTAACGTC GCCGGGGTCG GGGAAGCGCT CTATGCCGTG
CGCGAAACCC TTCCGACCTA CCGGGCCCAG AACGAGCAGG GCATGGCGAA CGCGGCGATC
GCCTTCGCCA AAGCGAGCTT CCGCCGCCGC TTCATGGCAT GCACGACGTC CATCGGCCCG
GGCGCCCTGA ATATGGTGAC GTCGGCCGCG CTCGCACACG TCAACCGGCT GCCGGTGCTC
CTCCTGCCCG GCGACATCTT CGCCAATCGC CGGCCGGACC CGGTCTTGCA GCAGGTAGAG
AGTTTTGGCG ACGGGACGAT CTCGGCGAAC GACTGCTTCC GCCCGGTCTC GCGTTACTTC
GACCGCATCA CGCGACCGGA GCAGATCATT CCGGCGCTTC GCCGCGCCAT GCAGGTGCTT
ACAGACCCGG CCGATTGCGG CCCGGTGACG CTTTCGCTCT GCCAGGACGT TCAGGCGGAA
GCCTATGACT ACCCGGAATC GTTCTTCGAC GAAAAAGTCT GGGTACCGCG CCGCGTCGAG
CCCGATCTCG ACGAACTGGC CGCGGCGATC GAGACGCTGA AGGTTGCCAG GAAGCCGATC
ATCATCGCAG GCGGAGGCGT GCTCTATTCG GAAGCGAGCG CCGACCTTGC CGAGTTCGCC
GAAAAACACG GCATTCCGGT CCTCGAGACG CAGGCCGGCA AGTCCGCCCT GCCGCACGCG
CATCCGCTGA ACATGGGTTC GGTCGGCGTC ACCGGTACCT CTGCCTCCAA CGCCTTGGCG
GAAGAGGCGG ACGTGGTGCT CGCCGTCGGC TCGCGGTTGC AGGATTTCAC TACCGGCTCC
TGGGCGCTTT TCAAGAATGA AGCGGTGAAG ATCATCGGAC TCAACGTCCA GCCCTTCGAC
GCCGGCAAGC ACGATGGACA GCCTTTGATC GCCGATGCGC GGGCCGGCCT CAACCGCATC
TCGGGCGGGC TCGGCAGCTA CAGCGCCGAC AGCGCCTGGA CAGAGAAGGC GAGGGCCGGA
AAGGCCGAGT GGCTTGCTGC AGCCGACAGG GCGACGGCCA CCACCAATGC GGCGCTTCCC
TCCGATGCGC AGGTCATCGG CGCCGTGCAA CGCGCCCGTG GCGGGAGGCA AACGACACTG
GTCTGCGCCG CCGGCGGGCT GCCCGGCGAG CTGCACAAGC TCTGGCAGGC GGAGTCTCCA
GGCAGCTACC ATATGGAATA TGGCTTCTCG ACCATGGGCT ATGAGGTCGC TGGCGGCCTT
GGCGTGAAAC TTGCCAAGCC CGAAAGTGAC GTGATCGTCA TGGTCGGAGA CGGCAGCTAC
ATGATGCTGA ACTCCGAGAT CGCCTCTTCG GTCATGCTCG GTGCCAAGCT TACGATCGTG
CTGCTCGACA ATGCCGGCTA TGGCTGCATC AACAGGTTGC AGATGGGTAC GGGCGGCGCC
AACTTCAACA ACCTGTTGAA GGACACACAT CACGTGGCGC TGCCGCAGAT CGACTTCGCC
GCCCACGCCG CCGCCATGGG CGCGGTCACC CGAAAGGTGG GATCGATCCC CGAACTCGAA
GCGGCGCTTG CCGAAACGGC AGACGAGGCT CGCACGACCG TCATCGTCAT CGATACCGAT
CCGCTGATCA CGACGGAAGC CGGTGGGCAC TGGTGGGACG TCGCGGTCCC GGAGGTTTCG
GACCGCGACC AGGTAAAGGC CGCCCGCGAA GATTACGAAA ATGCCCTCCG GTCACAGCGG
TTTGGTTGA
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| Protein sequence | MTQKTVRQGT VRLTMSQAVA RFLTRQMTII EGERVPIFGG VFAIFGHGNV AGVGEALYAV
RETLPTYRAQ NEQGMANAAI AFAKASFRRR FMACTTSIGP GALNMVTSAA LAHVNRLPVL
LLPGDIFANR RPDPVLQQVE SFGDGTISAN DCFRPVSRYF DRITRPEQII PALRRAMQVL
TDPADCGPVT LSLCQDVQAE AYDYPESFFD EKVWVPRRVE PDLDELAAAI ETLKVARKPI
IIAGGGVLYS EASADLAEFA EKHGIPVLET QAGKSALPHA HPLNMGSVGV TGTSASNALA
EEADVVLAVG SRLQDFTTGS WALFKNEAVK IIGLNVQPFD AGKHDGQPLI ADARAGLNRI
SGGLGSYSAD SAWTEKARAG KAEWLAAADR ATATTNAALP SDAQVIGAVQ RARGGRQTTL
VCAAGGLPGE LHKLWQAESP GSYHMEYGFS TMGYEVAGGL GVKLAKPESD VIVMVGDGSY
MMLNSEIASS VMLGAKLTIV LLDNAGYGCI NRLQMGTGGA NFNNLLKDTH HVALPQIDFA
AHAAAMGAVT RKVGSIPELE AALAETADEA RTTVIVIDTD PLITTEAGGH WWDVAVPEVS
DRDQVKAARE DYENALRSQR FG
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