Gene Smed_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3556 
Symbol 
ID5324444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3761452 
End bp3762315 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content64% 
IMG OID640792505 
Producthypothetical protein 
Protein accessionYP_001329206 
Protein GI150398739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.55196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCTCG CAATGGTGCT TGTCGGCAGC ACCGTGATCG CGAGCAAGAT CATCGCGGCC 
GATCTGCCGC CGTTCACGGC GACGGCGCTG CGCTTCGTGG TTGCCTTCCC GCTTTTTCTC
TTGTTGATGC GGGCAAGGAC GACCCCATGG CCGCGGCTGA CCAGGCGGGA CTGGCTCCTC
CTGCTGCTGC AGGCAGGCGC CGGCAGCGTC GGCTATACCA CACTGCTCAT TTCCGGCCTG
AAGTTTACCT CCGCGGCCGA TGCCGGCGTC ATCATCGGCA CGCTTCCTGT CGTATCGGCG
GCGATCGCCA TAGTCGTGCT TGGAGAAAGG CCGCACCCTT CCCTGTTTTT CGCGATCGGC
CTGGCCGCCG CAGGGGTGCT GGCGATCGTC TCCAAGTCCG GCAATGCCGG GCCACATTCG
CTTTCAGGCG GTGCGTTGAT CTTCGGTGCA GTCGTCTGCG AAGGTCTGTT CATCCTTCTC
AACAAGCGCC TGAATACGCC GATTCAACCG CTCGCTTTGT CTTCTCTCAT GGCTGGCTTC
GGTGGAGCCA TCGCCGCACC TTTCGCCCTT TTCGAGCCGG CCTGGGTTGA GGCGGCAACG
GTGCCGGCGT TTGCGGCAGT GGTCTACTAC GCTCTCGTAC CGACGGTTGG CGGTTTCCTG
CTGTGGTATG CGGGGCTCGC CAAGGTGAGC GGCACCGAGG CCTCGGTCTT CACGGCACTG
GCACCGGTCT CCGCCGTGCT TCTCGCCTAT ACGATACTCG ACGAGCCGCT GGGTCTCAGC
CAGGTGCTCG GCATCGGCTG CGTACTTATC GCCGTTTTAA CCCTGGCACT TCCCGGAGCG
CGAGCGCTTC CAGGCAAGCC TTGA
 
Protein sequence
MSLAMVLVGS TVIASKIIAA DLPPFTATAL RFVVAFPLFL LLMRARTTPW PRLTRRDWLL 
LLLQAGAGSV GYTTLLISGL KFTSAADAGV IIGTLPVVSA AIAIVVLGER PHPSLFFAIG
LAAAGVLAIV SKSGNAGPHS LSGGALIFGA VVCEGLFILL NKRLNTPIQP LALSSLMAGF
GGAIAAPFAL FEPAWVEAAT VPAFAAVVYY ALVPTVGGFL LWYAGLAKVS GTEASVFTAL
APVSAVLLAY TILDEPLGLS QVLGIGCVLI AVLTLALPGA RALPGKP