Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3543 |
Symbol | |
ID | 5324431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3748860 |
End bp | 3749978 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792493 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_001329194 |
Protein GI | 150398727 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTA CTCTAGAGCG GTCCAACCTG TTGAAATCGC TGAACCATGT CCACCGTGTG GTGGAACGGC GAAATACGAT CCCGATCCTT TCGAACGTGC TCTTGCGCTC CGACGGCGCC AGTCTCGAAA TGAAGGCGAC CGACCTCGAC CTGGAGATCA CCGAGGCGAC GCAGGCGCAG GTCGAGCAGG CGGGCGCCAC GACCGTTCCG GCGCACCTGC TCTATGACAT CGTGCGCAAG TTGCCCGACG GTTCAGAGGT GCTGCTTGCC ACCAATGCGG AGGGCACGGC GATGACGGTC GCCTCCGGCC GCTCCAAATT TTCGCTGCAG TGCCTGCCCC AATCGGACTT CCCCGACCTG ACCGCCGGCA CGTTCTCGCA TTCCTTCCGC CTGAAGGCGA CCGATCTGAA GATGCTGATC GACCGCACGC AGTTCGCGAT TTCGACGGAA GAGACGCGCT ATTATCTGAA CGGCATTTTC GTGCACACGG TCGAGAGCAA CGGCGAACTG AAGCTGCGCG CCGTCGCGAC CGACGGACAC AGGCTCGCCC GTGCTGATGT CGAAGCCCCG TCCGGCTCCG AGGGCATGCC CGGCATCATC ATCCCGCGCA AAACCGTAAG CGAATTGCAA AAATTGCTCG ACAATCCCGA CGTCGTCGTC ACAGTCGAGG TCTCGGACGC GAAAATCCGG TTGACGATCG GCTCCATCGT CATGACGTCG AAGCTGATCG ACGGGACCTT CCCCGACTAT CAGCGCGTGA TCCCCGCCAG CAATGACAAG GAATTGCGCG TCGACTGCCA GTCCTTCTCG CAGGCCGTCG ACCGCGTCTC GACGATCTCG TCCGAACGCG GACGCGCCGT GAAGCTGGCA CTCACCGATG GCCAGATGAC GCTGACGGTA AACAACCCGG ATTCGGGCAG CGCCACCGAA GAAGTGCCGG TCGGCTACGA AAGTGATCCG CTCGAGATCG GATTCAACGC AAAGTATCTT CTCGACATCA CCGCGCAACT GACCGGCAGC GAGGCGGTCT TCCTGCTCGC AGATCCCGGT TCGCCGACGC TGGTACGCGA CCTGGCCGCG GATGACGCGC TCTACGTCCT AATGCCGATG CGAGTCTAA
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Protein sequence | MRITLERSNL LKSLNHVHRV VERRNTIPIL SNVLLRSDGA SLEMKATDLD LEITEATQAQ VEQAGATTVP AHLLYDIVRK LPDGSEVLLA TNAEGTAMTV ASGRSKFSLQ CLPQSDFPDL TAGTFSHSFR LKATDLKMLI DRTQFAISTE ETRYYLNGIF VHTVESNGEL KLRAVATDGH RLARADVEAP SGSEGMPGII IPRKTVSELQ KLLDNPDVVV TVEVSDAKIR LTIGSIVMTS KLIDGTFPDY QRVIPASNDK ELRVDCQSFS QAVDRVSTIS SERGRAVKLA LTDGQMTLTV NNPDSGSATE EVPVGYESDP LEIGFNAKYL LDITAQLTGS EAVFLLADPG SPTLVRDLAA DDALYVLMPM RV
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