| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3536 |
|---|
| Symbol | |
|---|
| ID | 5324424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3743936 |
|---|
| End bp | 3744742 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640792486 |
|---|
| Product | undecaprenyl pyrophosphate phosphatase |
|---|
| Protein accession | YP_001329187 |
|---|
| Protein GI | 150398720 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATC AATCGATCAT AAGTGCGCTC GTGCTCGGGC TTATCGAAGG GCTGACGGAG
TTCATCCCGG TGTCGTCGAC GGCGCATGTG CTGCTCGCCG GGCACTTTCT CGGCTTCAGG
TCGCCCGGAA ATACTTTCGC CGTTCTGATC CAGCTCGGCG CCATACTGGC GATCCTGCTC
GTCTATTTCC AGAAGCTGCT GTCGATCGCG CTGGCCCTCC CCACGAGCGT CAGGGCGCGC
CGTTTCGTCC TGTCGGTTCT CCTCGCCTTC CTCCCGGCGG CGCTGATCGG CGCGGCTGCG
CATGGGTTCA TCAAGTCGGT GCTCTTCGAG ACGCCGATGC TGATCTGCGT CGTGCTGATC
GTCGGCGGCA TCATTCTCTA TGTGATCGAC CGTCTCCCCT TGACGCCCCG CTATACCGAC
GTGTTCGATT ATCCGCCGTC GCTGGCCCTC AAGATCGGCC TCTTCCAGTG CCTCGCCATG
ATCCCGGGCA CATCGCGTTC CGGCGCGACG ATCGCCGGCG CCTTGCTGAT GGGAACCGAC
AAGCGCTCCG CCGCGGAGTT TTCCTTCTTC CTGGCCATGC CGACAATGGT GGGAGCTTTC
GCGCTCGATC TTTACAAGAA TCGGGAAGCG CTCTCCATCG ACGATATCGG ACTGATCGCC
GCCGGTTTCA TTGCCGCGTT CATCGCCGGC ATTTTCGTGG TGCGTTCGCT GCTCGATTTC
GTATCGCATC GCGGCTTCAC GCCCTTTGCG ATCTGGCGCA TCCTCGTCGG CACCGCTGGC
CTGGTCGGAT TGTGGCTGCT AGGATAG
|
|---|
| Protein sequence | MADQSIISAL VLGLIEGLTE FIPVSSTAHV LLAGHFLGFR SPGNTFAVLI QLGAILAILL
VYFQKLLSIA LALPTSVRAR RFVLSVLLAF LPAALIGAAA HGFIKSVLFE TPMLICVVLI
VGGIILYVID RLPLTPRYTD VFDYPPSLAL KIGLFQCLAM IPGTSRSGAT IAGALLMGTD
KRSAAEFSFF LAMPTMVGAF ALDLYKNREA LSIDDIGLIA AGFIAAFIAG IFVVRSLLDF
VSHRGFTPFA IWRILVGTAG LVGLWLLG
|
|---|
| |