Gene Smed_3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3534 
Symbol 
ID5324422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3741913 
End bp3743076 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content63% 
IMG OID640792484 
Producthypothetical protein 
Protein accessionYP_001329185 
Protein GI150398718 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR00276] iron-sulfur cluster binding protein, putative 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCA ACGCCGCAGA AGCGGAGATC CAGGGCAGGA AACGACGGAC CCTCACCGCC 
TTCCTGAAGG AGGAAGCTGC GGCCAAGGGG TTTGACATCT GTCGCATCAC GCATCCGGAC
GCCATCCCGC AAGCGCCGGA GCGGCTGAGG CAGTTCCTGG CCGATGGCTG CCACGGCACG
ATGGAGTGGC TTGCCGAAAC CGAGGAGCGC CGATCCGACC CGCGCGTTCT CTGGGGGGAT
GTGCGCTCCA TTACCCTCTT CGGCATGAAT TACGCTCCTG AGGACGACCC GCGCGATGTC
CTTGCCAAGC GCGACCGCGG CGCGATCTCC GTCTACGCCC GGAACCGAGA TTATCACGAC
GTGGTCAAGG GCCGGCTCAA AGACATCGCA ACGCGTTTCG CCGCCCGTGC GGGCGAGGAC
GTAAAGGTCT TCGTCGATAC CGCACCGGTC ATGGAGAAGC CGCTCGCGGA AAAGGCCGGG
ATAGGCTGGC AGGGCAAGCA CACCAACCTG GTCAGCCGCG AGTTCGGCTC CTGGCTGTTT
CTCGGCAGCC TTTTCACGAC CGCCGAACTG GAACTGGACG AGCCCGAACG CGACCATTGC
GGTTCCTGCC GGGCCTGCCT CGACGCCTGT CCGACCGATG CCTTTCCAGC GCCCTACCGA
ATCGATGCGC GACGCTGCAT CTCTTATCTC ACGATCGAGC ACAAGGGACC GATTGCGCCG
GAGTACCGGC CGCTGATCGG CAACCGCATC TATGGCTGCG ACGATTGTCT CGCGGCCTGT
CCCTGGAACA AGTTCGCGCG CTCGGCATCG GAGATGAAGC TGAAGGCGCG GAACGATCTT
AGGGAACCGG AGCTCTCGTT TCTGCTGACC CTGGATGACG CAGCTTTCCG GACCTTCTTT
TCCGGATCTC CCGTCAAGCG CATCGGGCGC GACCGGTTCG TCCGGAATGC CTTGATCGCC
GCTGGCAATT CCGGCGAAAA GAGCCTGATA CCGGTCTGCA AGTTGCTGGC GGCGGACCCC
TCGCCGACCG TCAGAGGCAT GGCGGTCTGG GCGCTTTCGC GGCTGACTTC AACCGCTGAT
CTGGCGGACT TCGGCCGGCA ATGCGAAGCT GAAAATGATG ACGCGGTTCT TTCGGAATGG
AAAATGGCGG GAGTGAGCCT ATGA
 
Protein sequence
MPGNAAEAEI QGRKRRTLTA FLKEEAAAKG FDICRITHPD AIPQAPERLR QFLADGCHGT 
MEWLAETEER RSDPRVLWGD VRSITLFGMN YAPEDDPRDV LAKRDRGAIS VYARNRDYHD
VVKGRLKDIA TRFAARAGED VKVFVDTAPV MEKPLAEKAG IGWQGKHTNL VSREFGSWLF
LGSLFTTAEL ELDEPERDHC GSCRACLDAC PTDAFPAPYR IDARRCISYL TIEHKGPIAP
EYRPLIGNRI YGCDDCLAAC PWNKFARSAS EMKLKARNDL REPELSFLLT LDDAAFRTFF
SGSPVKRIGR DRFVRNALIA AGNSGEKSLI PVCKLLAADP SPTVRGMAVW ALSRLTSTAD
LADFGRQCEA ENDDAVLSEW KMAGVSL