Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3526 |
Symbol | |
ID | 5324414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3733954 |
End bp | 3734562 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640792476 |
Product | invasion associated locus B family protein |
Protein accession | YP_001329177 |
Protein GI | 150398710 |
COG category | [R] General function prediction only |
COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.281562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAT GTGTGCAGAA CGCATTGAGG GCGGTTTTCC TGGCTGCCCT CATCGGGAGC TTCAGTGGTT ATGGCAGGCT GGCGCTGGCG CAGGATCAGG AGGCTGCAAC GCCTGACTGG ACGACCGAAA GCTACGGCGA CTGGTCGGTG CGCTGCGCCA CCCGCGAGGG CGTTCCGCCC TGCGACATTG TTCAGGTGGC CACCGACAAT AAGACCGGGG CGCAGGTCAT GCGCCTGTCG ATCGCCCATG CCGGCGATCG CGAGCGGTAT GGCGTGCAAG TCATCGTTCC CCTGGGCGTA CTGATTTCGG GTGGTGTATT GGTCCGTATC GACGATGCGC ATGATATCAA GGACCTCAAG TTCACGCGTT GCGATGCGGG GGGGTGTTAC ATCGAGGCGC TGCTGGACGC CCAGATGCTT ACCCCGTTCC GGCGCGGCAA CAAGGGTGTG CTCGCCATTA TCGATGGAAA CGGTAAACCG CTGGTCGTCC CGCTCTCCTT CAAGGGCTTC ACAGCGGCAT CCGATGTCAT GATCGACCGT AACCGCCAGT GGGCGCAAGA CAAAGGGAAC AAGACCGAGA ATCAGAAACC GCCGCGGCGA TTACCATAA
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Protein sequence | MKTCVQNALR AVFLAALIGS FSGYGRLALA QDQEAATPDW TTESYGDWSV RCATREGVPP CDIVQVATDN KTGAQVMRLS IAHAGDRERY GVQVIVPLGV LISGGVLVRI DDAHDIKDLK FTRCDAGGCY IEALLDAQML TPFRRGNKGV LAIIDGNGKP LVVPLSFKGF TAASDVMIDR NRQWAQDKGN KTENQKPPRR LP
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