| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3523 |
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| Symbol | |
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| ID | 5324411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3725274 |
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| End bp | 3726920 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792473 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001329174 |
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| Protein GI | 150398707 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCGA CCTATGCTTT GGCACAGGTC CCTTCGACCC TCGATCCGGC GCGCATCGGG
GGCAATCTGG AGACGCAGCC GCTGCAGCGC AGGACCCAGT ACTCCATCAG TCTCCCCCGC
GTTGAGGATG GGGTCGTGCC GGAGGGTGCT TCGGGGGTCA CATTCGTCTT TGGCGGCGTG
AGGATCGAGG GGGCTGCCGT CCTGCCCGAG GCCAAGCTCC TGGCCGACTG GCCCCACAAG
GCCGGCGACA CGGTTCGGGT AGATGAGATT TTCGCGCTGG CCGAGTCGAT CAGTCAGGCC
TATCGCGAGG CTGGCTATGC GCTCTCCTTT GCCATGGTGC CCCAGCAGCA GATCGATGGC
GGTGTGTTCC GCATCCAGGT CGTCGAGGGT TTTGTCGAGC GGGTCGTGAT AAAGGGCGAT
CTGTCCGAGG CGGTTCGGGC CGACATGCAG GCTTTTGCCG ATCGCATCCT CGCCTCGCGA
CCGCTGCGCA CGGCAGATCT CGAGCGCTAC CTGCTGCTGA TCAACGATAT GCCGGGGGTC
ACGGCCTCCG GCGTCCTCTC CCCGGCTGCG GTCGAGGCGG GCGCGGTGCT GACGCTGGAG
GCGGCGCACG AGCCGGTCGC CGGTTCGGTC GGCTACAATA GTTTCATGCC AGATACTCTC
GGCACGCATG TCCTTGAGGC CAGTGGCGGG ATGCAGGGCG TTCTTACCGG ATCCGGGTCG
GTCAGCCTAA CGGTCAGGCG GTCATTGATG CCGGATGCCT ATCTGGGCGT ATCGGGGGAC
GCCTCGGTCG GGATCGGGAC GGAGGGCTTG CGCGTGGGCG TTTCCGGGCT GTGGTCCCGG
ATCGATCCGC GCGATATTCT GCTCGACGTC ATCGATTATA AAGGTTCGCT GGTTAGCGCA
CAGCTCTACG GGTTCTACCC GATCATCCGT AGCCGTGAAG AGAATCTGTC CATAGGAGCC
TCCTTTTCGC TGGACAACGA CAATTCGACG ATCCTCACCA CGGATTTCGT CGACGACCGG
CTCCGTTCGG TTTCGGTCTG GGGTAGGTAT GACTTCGTGG ATCAGACTCG CGCGGTAACC
TCGCTGAGGG GCGCGTTGAC GCATGGCGTC GATCTTTTCG GGGCGACCGG CAACAGCCGC
GCCAACGGGG TTGTGAAATA TACGAAGGTC GAACTGGACG CGCAGCGCAA TCAGCCTCTG
GCCGACGTCC TGGGCGGTGC GCTGTCCCTG CAGGCGACGG CGCACGCCCA GGCGGCTCTT
GGCTCGGGCG CCCTGTTCAG TGCGCCCGAG TGTTCCTTCG GCGGCCGCCG GTTCGGTCGG
GGGTTCGATT CCGGTATTTT GACTGGCGAT CATTGCGCGA TGGGAAGCGT CGAGCTGCAT
TGGGTGCGTT CCGTCGATTT CCCTGATCTC GGCGCCCCGG TGTTCCTGGA TTTCTATGCT
TTCGTCGATG GAGGCGTCGT CTGGCAGAAG GGCGAGGTGT TGTCCGGAGA ACCGGGAAGA
GGTCACGCAG CCTCGCTGGG GCTTGGCCTG AGTGTCCAGT TTACGGCGGA GGCTTCGGGT
CTACTTGAGG TCAGCCGGCC CGTGTCGCTG TCGGTCGGGA CCCCTGATGA GACGCGGATC
CTCGGGGCGC TGTCATTCAG GTTCTAG
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| Protein sequence | MSSTYALAQV PSTLDPARIG GNLETQPLQR RTQYSISLPR VEDGVVPEGA SGVTFVFGGV
RIEGAAVLPE AKLLADWPHK AGDTVRVDEI FALAESISQA YREAGYALSF AMVPQQQIDG
GVFRIQVVEG FVERVVIKGD LSEAVRADMQ AFADRILASR PLRTADLERY LLLINDMPGV
TASGVLSPAA VEAGAVLTLE AAHEPVAGSV GYNSFMPDTL GTHVLEASGG MQGVLTGSGS
VSLTVRRSLM PDAYLGVSGD ASVGIGTEGL RVGVSGLWSR IDPRDILLDV IDYKGSLVSA
QLYGFYPIIR SREENLSIGA SFSLDNDNST ILTTDFVDDR LRSVSVWGRY DFVDQTRAVT
SLRGALTHGV DLFGATGNSR ANGVVKYTKV ELDAQRNQPL ADVLGGALSL QATAHAQAAL
GSGALFSAPE CSFGGRRFGR GFDSGILTGD HCAMGSVELH WVRSVDFPDL GAPVFLDFYA
FVDGGVVWQK GEVLSGEPGR GHAASLGLGL SVQFTAEASG LLEVSRPVSL SVGTPDETRI
LGALSFRF
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