Gene Smed_3489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3489 
Symbol 
ID5324377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3696726 
End bp3697721 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content63% 
IMG OID640792441 
Productaldo/keto reductase 
Protein accessionYP_001329142 
Protein GI150398675 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACC GCAAGCTTGG CAACGAACTC ACCGTTTCGA CCGTCGGCCT CGGTTGCATG 
GGAATGAGCT TCGCCTATGG CGAAGCAGAC GAAAACCAAT CGATCCGCAC GCTTCATCGC
GCCGTTGAAC TCGGCGTCAA CTTCTTCGAC ACGGCGGAGG TCTACGGCCC CTACGAGAAC
GAGAAGCTGA TCGGCAAAGC GCTGAAAGAC CGGCGCGATC AGGTCGTAAT CGCCACCAAA
TTCGGCTTTC GAATCGAACC GGGCAAGCCC GCCACTCGAG CGATCAGGGG CGTCGACGGC
CGGCCGGAAA ATGCGAAAGC CGTTGCAGAG GCATCCCTTG GGAGACTCGG CATCGATATC
ATCGATCTCT ATTACCAACA CCGCGTCGAC CCGGCCGTAC CGATCGAGGA AACGGTCGGC
GCAATGGCCG AGCTGGTGAA AGAAGGCAAG GTGCGCGCCC TCGGACTTTC CGAGGCGAGC
GCCGCCACCA TCCGCCGCGC CCATTCCGTG CACCCGATCG CGGCCGTACA GAGCGAGTAC
TCACTCTGGT CGCGTGATCC GGAACAGGAG GTTCTCGCCA CCTGCCGCGA GCTCGGCATC
GGCTTCGTTC CTTACAGCCC GCTGGGGCGC GGCATGCTGA CGGGTGCGAT CCGCAGGCTC
GAGGATCTCG CTGCCGACGA TTTCCGGCGA TCTCTGCCGC GCTTTCAGCA GGAGAATTTC
GAGGCCAATG CGGCGCTAAT CGGCACGCTC GAAAGGCTCG CCTCGGCAAG AGAGGTGACC
GCTGCCCAGC TTGCACTCGC CTGGGTCGTC AATCAGGGCG AGGACATCGT GCCGATTCCC
GGGGCGCGCA GGATCGAGCA TCTGGAGCAG AACGTGGCCG CCGCCGGGAT CGTCCTCACA
GAAGGCGAAC GCGCAGAAAT CGGCGAAGCG CTTTCTCCGG AACGCGTCGC CGGCCGACGC
TACACGGACG CATCGCTTGC CCTGACGAAC AGGTAA
 
Protein sequence
MKYRKLGNEL TVSTVGLGCM GMSFAYGEAD ENQSIRTLHR AVELGVNFFD TAEVYGPYEN 
EKLIGKALKD RRDQVVIATK FGFRIEPGKP ATRAIRGVDG RPENAKAVAE ASLGRLGIDI
IDLYYQHRVD PAVPIEETVG AMAELVKEGK VRALGLSEAS AATIRRAHSV HPIAAVQSEY
SLWSRDPEQE VLATCRELGI GFVPYSPLGR GMLTGAIRRL EDLAADDFRR SLPRFQQENF
EANAALIGTL ERLASAREVT AAQLALAWVV NQGEDIVPIP GARRIEHLEQ NVAAAGIVLT
EGERAEIGEA LSPERVAGRR YTDASLALTN R