Gene Smed_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3466 
Symbol 
ID5324354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3674651 
End bp3675103 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content64% 
IMG OID640792418 
ProductDoxX family protein 
Protein accessionYP_001329119 
Protein GI150398652 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CCGCTGCCAA CAACCGCCCG CGCGCGATCC TGCCGGCGCT CGAAAGGATC 
TACCTGCCGC TCGACACCCT CGCCGAGACG CTGCTGCGCA TCGTCGCGGG CCTGCTGCTC
GTCACCCACG GCTACGGCAA GATCCTCGAC CCCTTCGGTG CAGCGGGGAT GGTGGAAGGG
CTCGGCTTCT ATCCGGGTGT GTTCTGGTCA CCCCTGCTTT CCGCAACCGA GTTCTTCGGC
GGTATCTTCA TCGCCATCGG CTTCCTGACG CGACCCGCCG CCTTCGCCGC GACGATCGTG
CTGCTGGTCA CAGTGTACTT CCACGGCATC GTCCAGGGTC AAGGCCTGGG CGGAGCGGAG
AAATCCATTC TCTGGGCGGC GATCACCTTC TTTTTCGCCA TCCGCGGTGC CAACAGCCAG
TCTGTCGACG CCAAGATCGG CCGGCAGTTC TGA
 
Protein sequence
MTDTAANNRP RAILPALERI YLPLDTLAET LLRIVAGLLL VTHGYGKILD PFGAAGMVEG 
LGFYPGVFWS PLLSATEFFG GIFIAIGFLT RPAAFAATIV LLVTVYFHGI VQGQGLGGAE
KSILWAAITF FFAIRGANSQ SVDAKIGRQF