Gene Smed_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3464 
Symbol 
ID5324352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3673498 
End bp3674124 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content62% 
IMG OID640792416 
Product3'-5' exonuclease 
Protein accessionYP_001329117 
Protein GI150398650 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATA CAATACGGTT CCACGAAGGC GATATTTCCG AGGCCGATGC CGCCCGCTAC 
AGGGGCGCGA TCGCGATCGA TACGGAAACG CTCGGACTGG TGCCCCGCCG CGATCGCCTC
TGCGTCGTGC AGCTTTCGTC GGGCGACGGC ACTGCCGATG TGATCCGGAT CGCTGCAGGC
CAGAAGCAGG CGCCGAACCT CGTCGCGATG CTTTCCGATC CAGCGCGGCA GAAAATCTTC
CATTTCGGCC GCTTCGACAT CGCTGTGCTG TTCCATACTT TCGGCGTGAC CGCTTCACCG
GTCTTCTGCA CCAAGATCGC CTCCCGCCTC GCCCGTACAT ATACGGATCG GCACGGCCTC
AAGGATAATC TCAAGGAACT GCTCGACGTC GATATCTCCA AGCAGCAGCA GTCTTCCGAC
TGGGCCGCCG ATATTCTGTC GCCGGCTCAG CTCGAATATG CCGCCTCCGA CGTGCTCCAC
CTGCACGCGC TGCGCGACAA GCTGACAGCG CGTCTTTTGC GCGATGGCCG GATGGAACTC
GCCGAGGCCT GCTTTTCGTT TCTCCCGACG CGTGCCAAGC TGGACCTGCT CGGCTGGGAG
GAGACGGACA TTTTCGCGCA TAGCTGA
 
Protein sequence
MANTIRFHEG DISEADAARY RGAIAIDTET LGLVPRRDRL CVVQLSSGDG TADVIRIAAG 
QKQAPNLVAM LSDPARQKIF HFGRFDIAVL FHTFGVTASP VFCTKIASRL ARTYTDRHGL
KDNLKELLDV DISKQQQSSD WAADILSPAQ LEYAASDVLH LHALRDKLTA RLLRDGRMEL
AEACFSFLPT RAKLDLLGWE ETDIFAHS