Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3464 |
Symbol | |
ID | 5324352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3673498 |
End bp | 3674124 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792416 |
Product | 3'-5' exonuclease |
Protein accession | YP_001329117 |
Protein GI | 150398650 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAATA CAATACGGTT CCACGAAGGC GATATTTCCG AGGCCGATGC CGCCCGCTAC AGGGGCGCGA TCGCGATCGA TACGGAAACG CTCGGACTGG TGCCCCGCCG CGATCGCCTC TGCGTCGTGC AGCTTTCGTC GGGCGACGGC ACTGCCGATG TGATCCGGAT CGCTGCAGGC CAGAAGCAGG CGCCGAACCT CGTCGCGATG CTTTCCGATC CAGCGCGGCA GAAAATCTTC CATTTCGGCC GCTTCGACAT CGCTGTGCTG TTCCATACTT TCGGCGTGAC CGCTTCACCG GTCTTCTGCA CCAAGATCGC CTCCCGCCTC GCCCGTACAT ATACGGATCG GCACGGCCTC AAGGATAATC TCAAGGAACT GCTCGACGTC GATATCTCCA AGCAGCAGCA GTCTTCCGAC TGGGCCGCCG ATATTCTGTC GCCGGCTCAG CTCGAATATG CCGCCTCCGA CGTGCTCCAC CTGCACGCGC TGCGCGACAA GCTGACAGCG CGTCTTTTGC GCGATGGCCG GATGGAACTC GCCGAGGCCT GCTTTTCGTT TCTCCCGACG CGTGCCAAGC TGGACCTGCT CGGCTGGGAG GAGACGGACA TTTTCGCGCA TAGCTGA
|
Protein sequence | MANTIRFHEG DISEADAARY RGAIAIDTET LGLVPRRDRL CVVQLSSGDG TADVIRIAAG QKQAPNLVAM LSDPARQKIF HFGRFDIAVL FHTFGVTASP VFCTKIASRL ARTYTDRHGL KDNLKELLDV DISKQQQSSD WAADILSPAQ LEYAASDVLH LHALRDKLTA RLLRDGRMEL AEACFSFLPT RAKLDLLGWE ETDIFAHS
|
| |